Factsheet for TraesCS6B01G046000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G046200.1	Wheat	extracellular	99.63	99.63
TraesCS6B01G046300.1	Wheat	extracellular	98.9	98.9
TraesCS6B01G046100.1	Wheat	extracellular	98.17	98.17
TraesCS6B01G046400.1	Wheat	extracellular	95.97	95.97
TraesCS1B01G225800.1	Wheat	extracellular	83.15	83.76
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	69.6	63.76
TraesCS1B01G226000.2	Wheat	extracellular	62.64	63.33
TraesCS3B01G014400.1	Wheat	cytosol	57.51	63.31
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	62.64	62.41
TraesCS6B01G245700.1	Wheat	extracellular	64.1	59.12
TraesCS1B01G225700.1	Wheat	extracellular	63.74	57.62
TraesCS3B01G526800.1	Wheat	extracellular	62.27	56.67
TraesCS3B01G524500.1	Wheat	extracellular	63.74	55.95
TraesCS1B01G222300.1	Wheat	extracellular	52.01	53.58
TraesCS4B01G375200.1	Wheat	extracellular	56.41	52.74
TraesCS4B01G375600.1	Wheat	extracellular	64.84	51.91
TraesCS2B01G480700.1	Wheat	extracellular	49.45	50.94
TraesCS2B01G432300.1	Wheat	plastid	48.72	50.76
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	61.9	49.56
TraesCS1B01G226100.1	Wheat	extracellular	56.41	49.36
TraesCS2B01G095600.1	Wheat	extracellular	45.42	48.63
TraesCS4B01G362100.1	Wheat	extracellular	47.62	48.15
GSMUA_AchrUn_...	Banana	extracellular	16.12	47.83
TraesCS4B01G362500.1	Wheat	extracellular	47.25	47.78
TraesCS4B01G362600.1	Wheat	extracellular, unclear	47.25	47.78
TraesCS2B01G432100.1	Wheat	extracellular	45.42	47.51
TraesCS2B01G607400.1	Wheat	extracellular	43.22	47.39
TraesCS2B01G095700.1	Wheat	extracellular	41.03	44.44
TraesCS6B01G275800.1	Wheat	extracellular	46.15	43.9
TraesCS2B01G122100.1	Wheat	extracellular	29.67	42.41
TraesCS6B01G275700.1	Wheat	extracellular	44.32	41.87
TraesCS3B01G535800.1	Wheat	extracellular	43.96	41.52
TraesCS2B01G432200.1	Wheat	extracellular, plastid	42.12	40.93
TraesCS5B01G376500.1	Wheat	extracellular	45.05	39.81
TraesCS6B01G264400.1	Wheat	extracellular	36.63	37.31
TraesCS2B01G390000.1	Wheat	extracellular	34.43	33.45
TraesCS4B01G326900.1	Wheat	extracellular	26.74	26.55
TraesCS4B01G327200.1	Wheat	extracellular	24.91	25.37
TraesCS4B01G327100.1	Wheat	golgi	23.81	23.99
TraesCS1B01G217200.1	Wheat	extracellular	23.08	22.91
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	21.25	18.35
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	20.51	17.55
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	21.25	9.01

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G046000	EnsemblPlants:TraesCS6B01G046000.1	SEG:seg	:

Description

No Description!

Coordinates

chr6B:-:27419028..27420100

Molecular Weight (calculated)

29866.6 Da

IEP (calculated)

9.335

GRAVY (calculated)

-0.197

Length

273 amino acids

Sequence
(BLAST)

001: MAGVSTNAIA LVLVTLLSVL VTSVRSAANY DTAAARSYNS GWLPAKATWY GAPTGAGPMD NGGACGFKNV NKCPFSSMTS CGNEPLFDGG AGCGSCYEIR
101: CIAANNPSCS GQPRTVVITD MNYYPVARYH FDLSGTAFGA MAKYGLNDKL RHAGIIDMQF RRVRCNFPGM KVTFHVQHGS NPNYLAVLVE YANVDGTVVR
201: MELMQTRNGR PTGSWEPMRR SWGSIWRMDT SRPLQGPFSM RITSDSGKTL VANNVIPAYW RPDKAYWSNV QFY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.