Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3D01G482800.1 | Wheat | extracellular | 94.81 | 95.14 |
TraesCS3A01G488000.1 | Wheat | extracellular | 93.43 | 93.43 |
TraesCS6B01G275700.1 | Wheat | extracellular | 89.97 | 89.97 |
HORVU0Hr1G018320.1 | Barley | extracellular | 88.93 | 88.93 |
TraesCS6B01G275800.1 | Wheat | extracellular | 70.59 | 71.08 |
EER98447 | Sorghum | extracellular | 71.97 | 67.75 |
Os02t0658800-01 | Rice | extracellular | 67.82 | 67.12 |
Zm00001d019560_P001 | Maize | plasma membrane | 70.59 | 66.23 |
EER98449 | Sorghum | extracellular | 71.28 | 66.03 |
Zm00001d019557_P001 | Maize | extracellular, plastid | 58.48 | 58.48 |
TraesCS2B01G432300.1 | Wheat | plastid | 49.83 | 54.96 |
TraesCS2B01G432200.1 | Wheat | extracellular, plastid | 51.9 | 53.38 |
TraesCS2B01G607400.1 | Wheat | extracellular | 45.67 | 53.01 |
TraesCS2B01G095600.1 | Wheat | extracellular | 46.71 | 52.94 |
TraesCS2B01G432100.1 | Wheat | extracellular | 46.71 | 51.72 |
TraesCS2B01G095700.1 | Wheat | extracellular | 44.64 | 51.19 |
TraesCS2B01G122100.1 | Wheat | extracellular | 32.87 | 49.74 |
TraesCS1B01G226000.2 | Wheat | extracellular | 43.94 | 47.04 |
TraesCS3B01G014300.1 | Wheat | extracellular, nucleus | 42.21 | 44.53 |
TraesCS1B01G222300.1 | Wheat | extracellular | 40.48 | 44.15 |
TraesCS6B01G046300.1 | Wheat | extracellular | 41.52 | 43.96 |
TraesCS6B01G046000.1 | Wheat | extracellular | 41.52 | 43.96 |
TraesCS3B01G014400.1 | Wheat | cytosol | 37.72 | 43.95 |
TraesCS6B01G046200.1 | Wheat | extracellular | 41.18 | 43.59 |
TraesCS5B01G376500.1 | Wheat | extracellular | 46.37 | 43.37 |
TraesCS6B01G046100.1 | Wheat | extracellular | 40.83 | 43.22 |
TraesCS6B01G046400.1 | Wheat | extracellular | 40.83 | 43.22 |
TraesCS1B01G225900.1 | Wheat | extracellular, mitochondrion, plastid | 43.6 | 42.28 |
TraesCS4B01G375200.1 | Wheat | extracellular | 42.56 | 42.12 |
TraesCS6B01G245700.1 | Wheat | extracellular | 42.56 | 41.55 |
TraesCS1B01G225800.1 | Wheat | extracellular | 38.75 | 41.33 |
TraesCS3B01G526800.1 | Wheat | extracellular | 42.21 | 40.67 |
TraesCS3B01G524500.1 | Wheat | extracellular | 43.6 | 40.51 |
TraesCS1B01G225700.1 | Wheat | extracellular | 42.21 | 40.4 |
TraesCS4B01G362100.1 | Wheat | extracellular | 37.37 | 40.0 |
TraesCS6B01G264400.1 | Wheat | extracellular | 37.02 | 39.93 |
TraesCS4B01G362500.1 | Wheat | extracellular | 37.02 | 39.63 |
TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 37.02 | 39.63 |
TraesCS2B01G480700.1 | Wheat | extracellular | 35.99 | 39.25 |
TraesCS5B01G079400.1 | Wheat | extracellular, plasma membrane | 43.6 | 36.95 |
TraesCS1B01G226100.1 | Wheat | extracellular | 39.79 | 36.86 |
TraesCS2B01G390000.1 | Wheat | extracellular | 35.29 | 36.3 |
TraesCS4B01G375600.1 | Wheat | extracellular | 39.45 | 33.43 |
TraesCS4B01G327200.1 | Wheat | extracellular | 26.64 | 28.73 |
TraesCS4B01G327100.1 | Wheat | golgi | 26.3 | 28.04 |
TraesCS4B01G326900.1 | Wheat | extracellular | 25.61 | 26.91 |
TraesCS1B01G217200.1 | Wheat | extracellular | 25.26 | 26.55 |
TraesCS7B01G468700.1 | Wheat | endoplasmic reticulum, extracellular | 22.49 | 20.57 |
TraesCS7B01G469200.1 | Wheat | endoplasmic reticulum, extracellular | 22.49 | 20.38 |
TraesCS7B01G469100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 22.15 | 9.94 |
Protein Annotations
Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 |
InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
PANTHER:PTHR31692:SF50 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G535800 | EnsemblPlants:TraesCS3B01G535800.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:+:775735548..775736742
Molecular Weight (calculated)
30350.7 Da
IEP (calculated)
9.736
GRAVY (calculated)
0.002
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKTCTLVLL GALVVLSLLV SPIACSSKLA KATGHHKPAA VRGQKNQTST NPSLSAAYGG GWLPAGATYY GNPNGAGSDG GACGYQTAVG HRPFSSMIAA
101: GSSPLFMAGM GCGACYDVKC TSNSACSGKP VTVVITDLSP GNLYPGEPCH FDMSGTALGA MAKPGMANKL RAGGVIRMQY KRVPCKYPGV NIAFRVDQGS
201: NPFYFKTLIE FVGDDGDLKA VDLKEAGSRA WTPMAQDWGA LWRLNNGRRL RAPFCLKLTS ESGRVLVVNN VIPVNWKAGA TYRSLVNYL
101: GSSPLFMAGM GCGACYDVKC TSNSACSGKP VTVVITDLSP GNLYPGEPCH FDMSGTALGA MAKPGMANKL RAGGVIRMQY KRVPCKYPGV NIAFRVDQGS
201: NPFYFKTLIE FVGDDGDLKA VDLKEAGSRA WTPMAQDWGA LWRLNNGRRL RAPFCLKLTS ESGRVLVVNN VIPVNWKAGA TYRSLVNYL
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.