Factsheet for TraesCS2B01G390000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G369200.2	Wheat	extracellular	96.8	97.49
TraesCS2A01G373000.1	Wheat	extracellular	96.09	96.09
Zm00001d002860_P002	Maize	extracellular	80.78	74.43
TraesCS6B01G264400.1	Wheat	extracellular	69.39	72.76
GSMUA_AchrUn_...	Banana	extracellular	66.55	71.1
Bra026272.1-P	Field mustard	extracellular	63.7	67.55
GSMUA_Achr1P00120_001	Banana	extracellular	63.7	67.29
CDY18990	Canola	extracellular	63.35	67.17
AT4G28250.1	Thale cress	extracellular	62.63	66.67
VIT_12s0059g00190.t01	Wine grape	extracellular	61.21	66.41
KRH26935	Soybean	extracellular	61.57	66.28
CDY58728	Canola	extracellular	62.28	66.04
CDY70556	Canola	extracellular	61.92	65.66
Bra024215.1-P	Field mustard	extracellular	61.92	65.66
GSMUA_Achr5P12080_001	Banana	extracellular	61.92	65.17
KRH25552	Soybean	extracellular	60.5	63.67
KRH55988	Soybean	extracellular	60.5	63.67
PGSC0003DMT400047177	Potato	extracellular	59.07	62.17
Solyc07g054170.2.1	Tomato	extracellular	59.07	62.17
AT2G20750.1	Thale cress	extracellular	59.79	61.99
KRH22402	Soybean	extracellular	56.58	61.63
CDY05789	Canola	extracellular	58.01	61.51
CDY31940	Canola	extracellular	57.65	61.13
Bra036499.1-P	Field mustard	extracellular	57.65	61.13
Solyc10g008440.2.1	Tomato	extracellular	56.23	60.31
PGSC0003DMT400055827	Potato	extracellular	55.87	59.92
TraesCS2B01G095600.1	Wheat	extracellular	39.86	43.92
TraesCS2B01G095700.1	Wheat	extracellular	38.08	42.46
TraesCS2B01G607400.1	Wheat	extracellular	36.65	41.37
TraesCS2B01G122100.1	Wheat	extracellular	27.76	40.84
TraesCS2B01G432100.1	Wheat	extracellular	37.37	40.23
TraesCS2B01G432300.1	Wheat	plastid	35.59	38.17
TraesCS2B01G432200.1	Wheat	extracellular, plastid	38.08	38.08
TraesCS6B01G275800.1	Wheat	extracellular	37.37	36.59
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	35.59	36.5
TraesCS6B01G275700.1	Wheat	extracellular	37.37	36.33
TraesCS3B01G014400.1	Wheat	cytosol	32.03	36.29
TraesCS1B01G222300.1	Wheat	extracellular	33.45	35.47
TraesCS3B01G535800.1	Wheat	extracellular	36.3	35.29
TraesCS1B01G226000.2	Wheat	extracellular	33.81	35.19
TraesCS6B01G046300.1	Wheat	extracellular	33.45	34.43
TraesCS6B01G046200.1	Wheat	extracellular	33.45	34.43
TraesCS6B01G046000.1	Wheat	extracellular	33.45	34.43
TraesCS6B01G046400.1	Wheat	extracellular	33.1	34.07
TraesCS6B01G046100.1	Wheat	extracellular	33.1	34.07
TraesCS2B01G480700.1	Wheat	extracellular	32.03	33.96
TraesCS6B01G245700.1	Wheat	extracellular	35.23	33.45
TraesCS3B01G526800.1	Wheat	extracellular	35.59	33.33
TraesCS1B01G225800.1	Wheat	extracellular	32.03	33.21
TraesCS4B01G375200.1	Wheat	extracellular	34.16	32.88
TraesCS4B01G362100.1	Wheat	extracellular	30.96	32.22
TraesCS3B01G524500.1	Wheat	extracellular	35.59	32.15
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	33.81	31.88
TraesCS4B01G362500.1	Wheat	extracellular	30.61	31.85
TraesCS4B01G362600.1	Wheat	extracellular, unclear	30.61	31.85
TraesCS1B01G225700.1	Wheat	extracellular	33.81	31.46
TraesCS5B01G376500.1	Wheat	extracellular	34.16	31.07
TraesCS1B01G226100.1	Wheat	extracellular	34.16	30.77
TraesCS4B01G375600.1	Wheat	extracellular	36.65	30.21
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	34.16	28.15
TraesCS1B01G217200.1	Wheat	extracellular	25.62	26.18
TraesCS4B01G327200.1	Wheat	extracellular	24.56	25.75
TraesCS4B01G326900.1	Wheat	extracellular	24.56	25.09
TraesCS4B01G327100.1	Wheat	golgi	23.84	24.72
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	24.91	22.15
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	24.2	21.32
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	23.84	10.4

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF48	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G390000	EnsemblPlants:TraesCS2B01G390000.1	SEG:seg	:

Description

No Description!

Coordinates

chr2B:-:553873854..553877538

Molecular Weight (calculated)

29515.2 Da

IEP (calculated)

8.692

GRAVY (calculated)

-0.046

Length

281 amino acids

Sequence
(BLAST)

001: MASSRAAAAP FALCILLLAS PAVSATFLFD DGKSASKGKS KDKAAVDVEW RPATATWYGD AEGDGSTGGA CGYGTLVDVV PMKARVGSVS PVLFKGGEGC
101: GACYKVRCLD HGICSRRAVT VIVTDECPGG GPCGGGNTHF DLSGAAFSRM AIAGAGAHLR DRGQLKVIYR RTACKYGGKN IAFHVNEGST SFWLSLLVEF
201: EDGEGDIGSM QLKQANSAKW LDMKHVWGAT WCLYGGPTAG PFSVRLTTLS APKTLTARDV IPRNWAPKGT YSSRLNFEAS L

Best Arabidopsis Sequence Match ( AT4G28250.1 )
(BLAST)

001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL

Arabidopsis Description

EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.