Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026272.1-P | Field mustard | extracellular | 92.05 | 91.7 |
| CDY18990 | Canola | extracellular | 91.67 | 91.32 |
| CDY70556 | Canola | extracellular | 90.91 | 90.57 |
| Bra024215.1-P | Field mustard | extracellular | 90.91 | 90.57 |
| CDY58728 | Canola | extracellular | 90.53 | 90.19 |
| AT2G20750.1 | Thale cress | extracellular | 73.86 | 71.96 |
| KRH55988 | Soybean | extracellular | 70.45 | 69.66 |
| KRH25552 | Soybean | extracellular | 70.08 | 69.29 |
| VIT_12s0059g00190.t01 | Wine grape | extracellular | 67.8 | 69.11 |
| KRH26935 | Soybean | extracellular | 68.18 | 68.97 |
| GSMUA_AchrUn_... | Banana | extracellular | 67.8 | 68.06 |
| KRH22402 | Soybean | extracellular | 64.39 | 65.89 |
| Os02t0639500-01 | Rice | extracellular | 64.39 | 65.13 |
| GSMUA_Achr1P00120_001 | Banana | extracellular | 65.53 | 65.04 |
| PGSC0003DMT400047177 | Potato | extracellular | 65.15 | 64.42 |
| Solyc07g054170.2.1 | Tomato | extracellular | 65.15 | 64.42 |
| TraesCS6A01G235800.1 | Wheat | extracellular | 65.15 | 64.42 |
| TraesCS6D01G218500.1 | Wheat | extracellular | 65.15 | 64.18 |
| PGSC0003DMT400055827 | Potato | extracellular | 63.64 | 64.12 |
| GSMUA_Achr5P12080_001 | Banana | extracellular | 64.77 | 64.04 |
| Zm00001d017377_P001 | Maize | extracellular | 64.77 | 63.81 |
| TraesCS6B01G264400.1 | Wheat | extracellular | 64.39 | 63.43 |
| EES05488 | Sorghum | extracellular | 65.53 | 63.37 |
| Solyc10g008440.2.1 | Tomato | extracellular | 62.88 | 63.36 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 64.02 | 63.06 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 67.05 | 62.99 |
| TraesCS2D01G369200.2 | Wheat | extracellular | 66.29 | 62.72 |
| TraesCS2B01G390000.1 | Wheat | extracellular | 66.67 | 62.63 |
| Zm00001d002860_P002 | Maize | extracellular | 65.91 | 57.05 |
| AT1G65680.1 | Thale cress | extracellular | 44.32 | 42.86 |
| AT1G65681.1 | Thale cress | cytosol | 35.98 | 42.6 |
| AT2G45110.1 | Thale cress | extracellular | 39.02 | 39.77 |
| AT3G60570.1 | Thale cress | extracellular | 38.64 | 38.64 |
| Os04t0530100-01 | Rice | extracellular, mitochondrion, vacuole | 37.88 | 30.96 |
| AT4G17030.1 | Thale cress | extracellular | 28.03 | 29.6 |
| AT3G45970.1 | Thale cress | extracellular | 25.0 | 24.91 |
| AT4G38400.1 | Thale cress | extracellular | 24.62 | 24.53 |
| AT3G45960.2 | Thale cress | extracellular | 23.86 | 23.95 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.3 | EntrezGene:828940 | UniProt:A0A178USU9 | ProteinID:AEE85458.1 |
| ArrayExpress:AT4G28250 | EnsemblPlantsGene:AT4G28250 | RefSeq:AT4G28250 | TAIR:AT4G28250 | RefSeq:AT4G28250-TAIR-G | EnsemblPlants:AT4G28250.1 |
| TAIR:AT4G28250.1 | Symbol:ATEXPB3 | EMBL:AY039986 | EMBL:AY133801 | ProteinID:CAB79627.1 | InterPro:Expan_Lol_pI |
| InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0006949 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0019953 | GO:GO:0030312 | GO:GO:0071555 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | RefSeq:NP_567803.1 |
| ProteinID:OAO96673.1 | PFAM:PF01357 | PFAM:PF03330 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF5 | UniProt:Q9M0I2 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | UniParc:UPI00000017E3 | SEG:seg | : |
Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
Coordinates
chr4:-:13999625..14002124
Molecular Weight (calculated)
28426.4 Da
IEP (calculated)
8.854
GRAVY (calculated)
0.064
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.