Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g008440.2.1 | Tomato | extracellular | 93.13 | 93.13 |
| PGSC0003DMT400047177 | Potato | extracellular | 70.61 | 69.29 |
| VIT_12s0059g00190.t01 | Wine grape | extracellular | 67.56 | 68.34 |
| GSMUA_AchrUn_... | Banana | extracellular | 67.94 | 67.68 |
| KRH26935 | Soybean | extracellular | 64.12 | 64.37 |
| CDY05789 | Canola | extracellular | 64.5 | 63.77 |
| AT4G28250.1 | Thale cress | extracellular | 64.12 | 63.64 |
| GSMUA_Achr1P00120_001 | Banana | extracellular | 64.5 | 63.53 |
| Bra036499.1-P | Field mustard | extracellular | 64.12 | 63.4 |
| CDY31940 | Canola | extracellular | 64.12 | 63.4 |
| KRH25552 | Soybean | extracellular | 64.5 | 63.3 |
| KRH55988 | Soybean | extracellular | 64.5 | 63.3 |
| GSMUA_Achr5P12080_001 | Banana | extracellular | 64.5 | 63.3 |
| Os02t0639500-01 | Rice | extracellular | 62.98 | 63.22 |
| CDY18990 | Canola | extracellular | 63.74 | 63.02 |
| CDY70556 | Canola | extracellular | 63.74 | 63.02 |
| Bra026272.1-P | Field mustard | extracellular | 63.74 | 63.02 |
| Bra024215.1-P | Field mustard | extracellular | 63.74 | 63.02 |
| CDY58728 | Canola | extracellular | 63.74 | 63.02 |
| TraesCS6A01G235800.1 | Wheat | extracellular | 63.36 | 62.17 |
| AT2G20750.1 | Thale cress | extracellular | 63.74 | 61.62 |
| TraesCS6B01G264400.1 | Wheat | extracellular | 62.98 | 61.57 |
| TraesCS6D01G218500.1 | Wheat | extracellular | 62.6 | 61.19 |
| HORVU6Hr1G060410.7 | Barley | extracellular | 62.21 | 60.82 |
| KRH22402 | Soybean | extracellular | 59.16 | 60.08 |
| Zm00001d017377_P001 | Maize | extracellular | 61.07 | 59.7 |
| EES05488 | Sorghum | extracellular | 61.45 | 58.97 |
| TraesCS2D01G369200.2 | Wheat | extracellular | 59.92 | 56.27 |
| TraesCS2B01G390000.1 | Wheat | extracellular | 59.92 | 55.87 |
| TraesCS2A01G373000.1 | Wheat | extracellular | 59.54 | 55.52 |
| Zm00001d002860_P002 | Maize | extracellular | 60.31 | 51.8 |
| PGSC0003DMT400048506 | Potato | plastid | 29.39 | 39.69 |
| PGSC0003DMT400030395 | Potato | cytosol, extracellular, mitochondrion, nucleus | 19.47 | 39.23 |
| PGSC0003DMT400095086 | Potato | plastid | 32.44 | 34.0 |
| Os04t0530100-01 | Rice | extracellular, mitochondrion, vacuole | 35.88 | 29.1 |
| PGSC0003DMT400067459 | Potato | extracellular | 27.48 | 28.69 |
| PGSC0003DMT400068379 | Potato | mitochondrion | 24.43 | 28.44 |
| PGSC0003DMT400067458 | Potato | extracellular | 27.1 | 28.29 |
| PGSC0003DMT400067456 | Potato | extracellular | 26.72 | 27.67 |
| PGSC0003DMT400004660 | Potato | extracellular | 26.72 | 27.45 |
| PGSC0003DMT400052810 | Potato | extracellular | 26.34 | 27.27 |
| PGSC0003DMT400047948 | Potato | extracellular | 24.43 | 24.62 |
| PGSC0003DMT400066943 | Potato | cytosol, plastid, vacuole | 35.88 | 20.48 |
Protein Annotations
| EntrezGene:102599581 | Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.3 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 |
| GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI |
| UniProt:M1BYM0 | PFAM:PF01357 | PFAM:PF03330 | EnsemblPlantsGene:PGSC0003DMG400021682 | PGSC:PGSC0003DMG400021682 | EnsemblPlants:PGSC0003DMT400055827 |
| PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF5 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | TMHMM:TMhelix |
| UniParc:UPI00029650FC | RefSeq:XP_006366023.1 | SEG:seg | : | : | : |
Description
Beta-expansin 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400021682]
Coordinates
chr10:+:3954302..3957191
Molecular Weight (calculated)
28637.6 Da
IEP (calculated)
10.345
GRAVY (calculated)
-0.066
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSRICRVSY VVSVILAFFA VIASATTLRR AANPHWHSAS ATWYGSPNGD GSDGGACGYG TMVDVKPFRA RVGAVSSALF KKGEGCGACY KVRCLDKTIC
101: SKRAVTIIVT DESPALTKGL VHFDLSGSAF GRMALSGRNI NLRNRGKISI IYRKTPCKYP GQNIAFHVNV GSTAYWLSLL VEFEDGDGDI GSMQIREARS
201: NQWLTMTHLW GANWCIIGGP LQGPFSIKLT TLTKRRTLSA RDVIPSKWTP KATYTSRLNF LK
101: SKRAVTIIVT DESPALTKGL VHFDLSGSAF GRMALSGRNI NLRNRGKISI IYRKTPCKYP GQNIAFHVNV GSTAYWLSLL VEFEDGDGDI GSMQIREARS
201: NQWLTMTHLW GANWCIIGGP LQGPFSIKLT TLTKRRTLSA RDVIPSKWTP KATYTSRLNF LK
001: MQLFPVMLAT LCIVLQLLIG SSALATTNRH VSNSHWLPAV ATWYGSPNGD GSDGGACGYG TLVDVKPLHA RVGAVNPILF KNGEGCGACY KVRCLDKSIC
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
101: SRRAVTVIIT DECPGCSKTS THFDLSGAVF GRLAIAGESG PLRNRGLIPV IYRRTACKYR GKNIAFHVNE GSTDFWLSLL VEFEDGEGDI GSMHIRQAGA
201: REWLEMKHVW GANWCIIGGP LKGPFSIKLT TLSAGKTLSA TDVVPRNWAP KATYSSRLNF SPVL
Arabidopsis Description
EXPB3EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.