Factsheet for PGSC0003DMT400068379

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g060970.1.1	Tomato	extracellular	90.22	81.85
PGSC0003DMT400067458	Potato	extracellular	67.11	60.16
CDX90493	Canola	cytosol, extracellular, nucleus	29.78	51.15
PGSC0003DMT400067459	Potato	extracellular	55.11	49.4
PGSC0003DMT400067456	Potato	extracellular	52.44	46.64
Bra012687.1-P	Field mustard	extracellular	50.67	45.6
Bra012684.1-P	Field mustard	extracellular	49.78	44.8
CDY09659	Canola	plasma membrane	49.78	44.8
CDY65447	Canola	extracellular	49.78	44.8
AT4G17030.1	Thale cress	extracellular	49.33	44.4
VIT_00s1455g00010.t01	Wine grape	extracellular	49.33	44.22
Bra040107.1-P	Field mustard	extracellular	48.89	44.0
CDY42954	Canola	extracellular	48.89	44.0
CDY35606	Canola	extracellular	48.44	43.6
KRH77296	Soybean	extracellular	48.0	43.03
KRH28194	Soybean	extracellular	47.11	42.23
VIT_00s0309g00050.t01	Wine grape	extracellular	46.67	41.83
KRH04222	Soybean	extracellular	46.22	41.43
VIT_00s0309g00090.t01	Wine grape	extracellular	46.22	41.43
KRH57515	Soybean	extracellular	45.78	41.04
KRH57508	Soybean	endoplasmic reticulum	41.33	38.11
KRH04215	Soybean	nucleus	42.22	38.0
KRH04218	Soybean	extracellular	42.22	38.0
PGSC0003DMT400047948	Potato	extracellular	42.22	36.54
PGSC0003DMT400052810	Potato	extracellular	40.89	36.36
KRH04221	Soybean	extracellular	39.56	36.03
PGSC0003DMT400004660	Potato	extracellular	40.44	35.69
KRH57512	Soybean	extracellular	39.11	35.63
KRH04220	Soybean	endoplasmic reticulum	38.67	35.08
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	17.78	30.77
PGSC0003DMT400048506	Potato	plastid	23.56	27.32
PGSC0003DMT400047177	Potato	extracellular	30.67	25.84
PGSC0003DMT400055827	Potato	extracellular	28.44	24.43
PGSC0003DMT400095086	Potato	plastid	26.22	23.6
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	30.22	14.81

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	UniProt:M1CIZ2	PFAM:PF01357	PFAM:PF03330	EnsemblPlantsGene:PGSC0003DMG400026590	PGSC:PGSC0003DMG400026590
EnsemblPlants:PGSC0003DMT400068379	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF10
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590	SUPFAM:SSF50685	UniParc:UPI0002952F1B	:

Description

Major pollen allergen Ory s 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400026590]

Coordinates

chr6:-:44271332..44273950

Molecular Weight (calculated)

24721.5 Da

IEP (calculated)

8.194

GRAVY (calculated)

-0.360

Length

225 amino acids

Sequence
(BLAST)

001: MQLRQTIIRP LFRGSCRSGA CGYGDYGKDV NSGDVCTASK RLYKNGAACG TCYQVRCKDK DLCSDEGTKV VVTDNGEGHG TDFILSSRGY AKMAKQPNMA
101: QHLFAKGVVE VEYRRVSCKY GGGNLMVKVQ EHSKHPNYLA ILVMNQGGAT DILSVEVFQE ETKEWISMRR AYGAIFDLSN PPSGELKVRF LTSAGAETKW
201: VESDKAVIPA EWKAGITIET DIQLS

Best Arabidopsis Sequence Match ( AT4G17030.1 )
(BLAST)

001: MKHSHVLLLL FVQVIVLLPL LCLSDDFVNS RATYYGSPDC KANPRGHCGY GEFGRDINNG EVSGVSWRLW NNGTGCGACY QVRCKIPPHC SEEGVYVVAT
101: DSGEGDGTDF ILSPKAYGRM ARPGTENQLY SFGVVNVEYQ RIPCRYAGYN LVYKIHEKSY NPHYLAILVL YVGGVNDILA VEVWQEDCKE WRRMRRVFGA
201: VHDLQNPPRG TLTLRFLVYG SAGINWIQSP NAIPADWTAG ATYDSNILLT

Arabidopsis Description

EXLB1Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.