Factsheet for Bra036499.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31940	Canola	extracellular	100.0	100.0
AT2G20750.1	Thale cress	extracellular	85.66	83.76
Bra024215.1-P	Field mustard	extracellular	73.58	73.58
Bra026272.1-P	Field mustard	extracellular	72.83	72.83
VIT_12s0059g00190.t01	Wine grape	extracellular	63.4	64.86
PGSC0003DMT400055827	Potato	extracellular	63.4	64.12
KRH25552	Soybean	extracellular	64.53	64.04
KRH55988	Soybean	extracellular	64.53	64.04
KRH26935	Soybean	extracellular	63.02	63.98
Solyc10g008440.2.1	Tomato	extracellular	62.64	63.36
TraesCS6A01G235800.1	Wheat	extracellular	63.77	63.3
Os02t0639500-01	Rice	extracellular	62.26	63.22
GSMUA_AchrUn_...	Banana	extracellular	62.26	62.74
TraesCS6D01G218500.1	Wheat	extracellular	63.4	62.69
TraesCS6B01G264400.1	Wheat	extracellular	63.02	62.31
Solyc07g054170.2.1	Tomato	extracellular	62.64	62.17
PGSC0003DMT400047177	Potato	extracellular	62.26	61.8
Zm00001d017377_P001	Maize	extracellular	62.26	61.57
GSMUA_Achr5P12080_001	Banana	extracellular	61.89	61.42
GSMUA_Achr1P00120_001	Banana	extracellular	61.13	60.9
KRH22402	Soybean	extracellular	59.25	60.85
HORVU6Hr1G060410.7	Barley	extracellular	61.51	60.82
EES05488	Sorghum	extracellular	62.64	60.81
TraesCS2D01G369200.2	Wheat	extracellular	61.13	58.06
TraesCS2A01G373000.1	Wheat	extracellular	61.51	58.01
TraesCS2B01G390000.1	Wheat	extracellular	61.13	57.65
Zm00001d002860_P002	Maize	extracellular	62.26	54.1
Bra004889.1-P	Field mustard	extracellular	41.89	40.36
Bra000370.1-P	Field mustard	extracellular	39.25	40.15
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	18.49	35.51
Bra035987.1-P	Field mustard	extracellular	35.47	35.47
Bra003421.1-P	Field mustard	extracellular	33.96	33.83
Bra004890.1-P	Field mustard	extracellular	37.74	31.45
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	38.11	31.27
Bra012684.1-P	Field mustard	extracellular	27.92	29.6
Bra012687.1-P	Field mustard	extracellular	27.92	29.6
Bra040107.1-P	Field mustard	extracellular	27.92	29.6
Bra033563.1-P	Field mustard	extracellular	25.66	25.76
Bra014484.1-P	Field mustard	extracellular	34.72	25.56
Bra011899.1-P	Field mustard	extracellular	25.28	24.91

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.3	EnsemblPlantsGene:Bra036499	EnsemblPlants:Bra036499.1	EnsemblPlants:Bra036499.1-P
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M4F5Z0	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF26	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0000F35E6D
SEG:seg	:	:	:	:	:

Description

AT2G20750 (E=9e-118) ATEXPB1, EXPB1, ATHEXP BETA 1.5 | ATEXPB1 (ARABIDOPSIS THALIANA EXPANSIN B1)

Coordinates

chrA07:-:57081..58797

Molecular Weight (calculated)

28593.4 Da

IEP (calculated)

9.936

GRAVY (calculated)

-0.097

Length

265 amino acids

Sequence
(BLAST)

001: MQLLSTLCFL FLQLLSRGDA SASHSNRHRS APHWLPATAT WYGSPEGDGS SGGACGYGSL VDVKPFKARV GAVSPLLFKS GEGCGACYKV RCLDKTICSK
101: RAVTIIVTDQ SPSGPSARAK HTHFDLSGAA FGHLSIPGHS GIMRNRGLIS VLYRQTACKY REKNIAFHVN AGSTAYWLSL LIEYEDGEGD IGSMHIRQAG
201: SKEWIAMKHI WGANWCIVGG PLKGPLSVKL TTLSNNKTLS AADVIPKKWV PKATYTSRLN FSPVL

Best Arabidopsis Sequence Match ( AT2G20750.1 )
(BLAST)

001: MQLFPVILPT LCVFLHLLIS GSGSTPPLTH SNQQVAATRW LPATATWYGS AEGDGSSGGA CGYGSLVDVK PFKARVGAVS PILFKGGEGC GACYKVRCLD
101: KTICSKRAVT IIATDQSPSG PSAKAKHTHF DLSGAAFGHM AIPGHNGVIR NRGLLNILYR RTACKYRGKN IAFHVNAGST DYWLSLLIEY EDGEGDIGSM
201: HIRQAGSKEW ISMKHIWGAN WCIVEGPLKG PFSVKLTTLS NNKTLSATDV IPSNWVPKAT YTSRLNFSPV L

Arabidopsis Description

EXPB1Expansin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKU2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.