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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74710 Canola extracellular 99.64 100.0
AT1G65680.1 Thale cress extracellular 77.09 77.66
Bra004890.1-P Field mustard extracellular 78.91 68.24
VIT_15s0021g02700.t01 Wine grape extracellular 63.27 63.74
VIT_15s0021g02670.t01 Wine grape extracellular 61.82 62.27
KRH75302 Soybean extracellular 56.73 56.32
KRG88934 Soybean extracellular, vacuole 56.73 56.32
TraesCS2D01G411000.1 Wheat extracellular 52.73 55.34
Os04t0552000-00 Rice extracellular 53.09 55.3
TraesCS2A01G413600.1 Wheat extracellular 52.36 54.96
EES11234 Sorghum extracellular 52.36 54.75
TraesCS2B01G432300.1 Wheat plastid 52.0 54.58
Zm00001d017493_P001 Maize extracellular 52.73 54.31
Zm00001d026170_P001 Maize extracellular 51.64 54.2
Os05t0246300-01 Rice extracellular 52.0 54.17
KXG19818 Sorghum extracellular 50.91 54.05
KRH33426 Soybean extracellular 53.45 54.04
GSMUA_Achr2P13730_001 Banana extracellular 51.27 53.82
EES07509 Sorghum extracellular 51.64 53.79
TraesCS2A01G580200.1 Wheat extracellular 49.09 53.78
EER88254 Sorghum extracellular 50.55 53.67
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 46.18 53.59
HORVU0Hr1G016380.2 Barley extracellular 51.64 53.58
GSMUA_Achr2P13740_001 Banana extracellular 50.91 53.44
TraesCS2B01G607400.1 Wheat extracellular 48.36 53.41
TraesCS2A01G580300.1 Wheat extracellular 48.36 53.41
TraesCS2D01G592900.1 Wheat extracellular 48.0 53.01
KRH65410 Soybean extracellular 51.27 52.81
KRH33423 Soybean extracellular 52.36 51.99
Zm00001d051368_P001 Maize extracellular 29.82 51.9
Zm00001d045861_P001 Maize mitochondrion 49.82 51.7
TraesCS6A01G249700.1 Wheat extracellular 49.82 51.5
TraesCS6D01G231400.1 Wheat extracellular 49.82 51.5
HORVU2Hr1G097480.1 Barley extracellular 52.73 51.24
TraesCS2D01G078900.1 Wheat extracellular 47.27 51.18
TraesCS2A01G081200.1 Wheat extracellular 47.27 51.18
HORVU2Hr1G013360.1 Barley extracellular 46.55 51.0
TraesCS2B01G095600.1 Wheat extracellular 47.27 50.98
GSMUA_Achr2P13750_001 Banana extracellular 48.36 50.96
Zm00001d045792_P001 Maize extracellular 49.82 50.74
TraesCS6A01G249400.2 Wheat extracellular 48.73 50.57
TraesCS2A01G080800.1 Wheat extracellular 46.55 50.39
TraesCS2D01G078800.1 Wheat extracellular 45.82 49.61
Os02t0658600-00 Rice plastid 48.73 49.08
TraesCSU01G009600.1 Wheat extracellular 45.09 49.01
TraesCS2B01G095700.1 Wheat extracellular 44.0 48.02
TraesCS2B01G122100.1 Wheat extracellular 33.09 47.64
TraesCS2D01G104800.1 Wheat extracellular 43.64 47.24
TraesCS2D01G078600.1 Wheat extracellular 40.73 46.86
TraesCS2A01G105200.1 Wheat extracellular 43.27 46.85
Bra000370.1-P Field mustard extracellular 43.27 45.95
GSMUA_AchrUn_... Banana extracellular 29.82 45.56
Bra035987.1-P Field mustard extracellular 43.64 45.28
Bra026272.1-P Field mustard extracellular 41.82 43.4
Bra036499.1-P Field mustard extracellular 40.36 41.89
Bra024215.1-P Field mustard extracellular 39.64 41.13
EER93754 Sorghum extracellular 45.45 40.85
KXG37946 Sorghum extracellular 48.0 40.62
TraesCS5D01G384200.1 Wheat extracellular 45.45 40.58
HORVU2Hr1G013340.1 Barley extracellular 42.91 40.41
Bra003421.1-P Field mustard extracellular 38.91 40.23
TraesCS5B01G376500.1 Wheat extracellular 45.09 40.13
Os03t0645000-00 Rice mitochondrion 44.73 39.3
Bra004891.1-P Field mustard cytosol, nucleus, plastid 18.91 37.68
Bra040107.1-P Field mustard extracellular 30.55 33.6
Bra012687.1-P Field mustard extracellular 30.55 33.6
Bra012684.1-P Field mustard extracellular 30.55 33.6
Bra014484.1-P Field mustard extracellular 40.36 30.83
HORVU5Hr1G092910.9 Barley plastid 45.45 30.19
Bra033563.1-P Field mustard extracellular 28.36 29.55
Bra011899.1-P Field mustard extracellular 28.0 28.62
Zm00001d033231_P003 Maize extracellular 45.45 17.51
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EnsemblPlantsGene:Bra004889EnsemblPlants:Bra004889.1EnsemblPlants:Bra004889.1-P
InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575
GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749
InterPro:IPR036908InterPro:LolPIUniProt:M4CL03PFAM:PF01357PFAM:PF03330PRINTS:PR00829
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF3InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590SUPFAM:SSF50685TMHMM:TMhelixUniParc:UPI0002547F0B
Description
AT1G65680 (E=2e-123) ATEXPB2, EXPB2, ATHEXP BETA 1.4 | ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)
Coordinates
chrA05:+:2314366..2315456
Molecular Weight (calculated)
29499.9 Da
IEP (calculated)
4.559
GRAVY (calculated)
0.037
Length
275 amino acids
Sequence
(BLAST)
001: MTILVLERCH IIMNLFFGLI TFILLNSAHC FYPKRLNISA ATGDSDWSLA GATWYGSPTG YGSNGGACGY ENAVAQAPFS SMVSAGGPSL YKSGKGCGAC
101: YQIKCTSKPA CSTNPVTVVI TDECKGCVTE SVHFDLSGTA FGALASSGQD SQLRDVGVLQ ILYRKVECNY IGETVTFHVE NGSNPYSFAA LIEYEDGDGE
201: IGLVELKQAL DSDTWLPMSQ SWGAVWKLDV TSPLRAPLSL RLTYLDSGET VMASDVIPAG WEPGEKYKSN VNFQV
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.