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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER88254 Sorghum extracellular 98.46 98.46
Zm00001d045861_P001 Maize mitochondrion 84.94 83.02
Zm00001d045792_P001 Maize extracellular 84.94 81.48
EES07509 Sorghum extracellular 73.36 71.97
HORVU0Hr1G016380.2 Barley extracellular 72.2 70.57
TraesCS6A01G249700.1 Wheat extracellular 72.2 70.3
TraesCS6D01G231400.1 Wheat extracellular 72.2 70.3
TraesCS6A01G249400.2 Wheat extracellular 71.43 69.81
TraesCS2D01G078900.1 Wheat extracellular 66.41 67.72
HORVU2Hr1G013380.1 Barley cytosol, extracellular, mitochondrion 61.39 67.09
TraesCS2A01G081200.1 Wheat extracellular 65.64 66.93
TraesCS2B01G095600.1 Wheat extracellular 65.64 66.67
HORVU2Hr1G013360.1 Barley extracellular 64.48 66.53
Os02t0658600-00 Rice plastid 69.11 65.57
EES11234 Sorghum extracellular 66.41 65.4
TraesCS2A01G080800.1 Wheat extracellular 64.09 65.35
TraesCS2B01G607400.1 Wheat extracellular 62.16 64.66
TraesCS2A01G580200.1 Wheat extracellular 62.55 64.54
TraesCS2A01G580300.1 Wheat extracellular 61.78 64.26
TraesCS2D01G592900.1 Wheat extracellular 61.78 64.26
TraesCSU01G009600.1 Wheat extracellular 61.78 63.24
TraesCS2D01G078800.1 Wheat extracellular 61.0 62.2
TraesCS2B01G095700.1 Wheat extracellular 59.85 61.51
TraesCS2D01G078600.1 Wheat extracellular 56.37 61.09
TraesCS2D01G104800.1 Wheat extracellular 58.69 59.84
TraesCS2A01G105200.1 Wheat extracellular 58.3 59.45
TraesCS2B01G122100.1 Wheat extracellular 43.63 59.16
GSMUA_AchrUn_... Banana extracellular 58.69 57.58
VIT_15s0021g02670.t01 Wine grape extracellular 59.46 56.41
VIT_15s0021g02700.t01 Wine grape extracellular 59.07 56.04
Solyc01g090810.2.1 Tomato extracellular 58.3 54.91
GSMUA_Achr4P26910_001 Banana extracellular 56.37 53.68
CDY18950 Canola cytosol, extracellular, plastid 49.03 53.59
CDY72345 Canola cytosol 50.19 53.28
PGSC0003DMT400048506 Potato plastid 39.38 52.58
CDY18951 Canola extracellular 55.6 52.36
HORVU2Hr1G013340.1 Barley extracellular 58.69 52.05
CDY18948 Canola extracellular 39.0 51.79
CDX74711 Canola extracellular 52.12 51.72
AT1G65680.1 Thale cress extracellular 54.44 51.65
KRH33426 Soybean extracellular 53.67 51.1
CDX74710 Canola extracellular 54.05 51.09
CDY70406 Canola extracellular 54.05 51.09
Bra004889.1-P Field mustard extracellular 54.05 50.91
KRG88934 Soybean extracellular, vacuole 54.05 50.54
KRH75302 Soybean extracellular 54.05 50.54
AT2G45110.1 Thale cress extracellular 50.19 50.19
KRH65410 Soybean extracellular 51.74 50.19
EES11235 Sorghum extracellular 56.37 50.17
EES05780 Sorghum extracellular 57.14 50.17
CDY18946 Canola extracellular 51.35 50.0
EES07508 Sorghum extracellular 56.76 50.0
KRH33423 Soybean extracellular 53.28 49.82
EER93754 Sorghum extracellular 58.69 49.67
AT1G65681.1 Thale cress cytosol 42.47 49.33
VIT_09s0002g08510.t01 Wine grape extracellular 52.9 49.1
Bra000370.1-P Field mustard extracellular 49.03 49.03
CDX83404 Canola extracellular 49.03 49.03
EES11233 Sorghum extracellular 54.05 48.61
CDY72505 Canola cytosol 29.73 48.12
CDY72655 Canola cytosol, plastid 31.27 47.93
Bra035987.1-P Field mustard extracellular 48.65 47.55
CDX96901 Canola extracellular 48.65 47.55
CDY14888 Canola extracellular 48.65 47.55
Solyc10g018500.1.1 Tomato extracellular 48.65 47.55
Solyc01g090820.1.1 Tomato extracellular 47.1 47.47
EER91942 Sorghum extracellular 47.49 46.24
KXG37946 Sorghum extracellular 57.92 46.15
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 22.78 45.38
Solyc03g093390.2.1 Tomato extracellular, nucleus 49.81 45.26
EER91947 Sorghum extracellular 45.95 44.24
EER98447 Sorghum extracellular 51.74 43.65
KXG38969 Sorghum extracellular 44.79 43.61
EER94537 Sorghum extracellular 44.4 43.23
KXG38972 Sorghum extracellular 44.4 43.23
Solyc07g049540.1.1 Tomato extracellular 42.86 43.19
EER98449 Sorghum extracellular 51.74 42.95
AT3G60570.1 Thale cress extracellular 43.63 42.8
Bra004890.1-P Field mustard extracellular 52.51 42.77
CDX95627 Canola extracellular 45.95 42.65
Solyc05g052330.1.1 Tomato extracellular 43.63 42.16
PGSC0003DMT400095086 Potato plastid 40.15 41.6
OQU93456 Sorghum cytosol, extracellular 33.98 41.51
KXG40417 Sorghum mitochondrion 47.49 41.41
EER91945 Sorghum extracellular 44.02 41.3
EER91949 Sorghum extracellular 44.79 41.13
EER94506 Sorghum extracellular 44.79 41.13
EER91948 Sorghum extracellular 43.24 40.29
Bra004891.1-P Field mustard cytosol, nucleus, plastid 21.24 39.86
CDY71186 Canola extracellular 41.7 39.85
Bra003421.1-P Field mustard extracellular 40.93 39.85
CDX67835 Canola extracellular 40.93 39.85
EER94500 Sorghum extracellular 44.4 39.66
CDX74713 Canola extracellular 52.51 39.65
OQU92157 Sorghum extracellular 47.1 39.61
OQU93455 Sorghum extracellular 39.0 39.45
OQU93459 Sorghum extracellular 40.15 39.1
KXG40416 Sorghum extracellular, vacuole 47.88 38.75
EER95684 Sorghum extracellular 39.77 38.72
EES05488 Sorghum extracellular 40.54 38.46
EER95683 Sorghum extracellular 39.38 38.35
OQU93457 Sorghum extracellular 39.38 38.35
OQU93458 Sorghum extracellular 39.38 38.35
KXG38933 Sorghum mitochondrion 46.33 37.62
OQU92156 Sorghum plastid 47.1 37.54
EES05315 Sorghum extracellular 44.79 36.48
CDY48362 Canola extracellular 46.33 33.61
Bra014484.1-P Field mustard extracellular 46.72 33.61
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 52.12 29.41
EER99370 Sorghum extracellular 30.12 28.47
EER95568 Sorghum extracellular 28.96 27.78
KXG38992 Sorghum extracellular 26.64 24.47
OQU89980 Sorghum extracellular, plasma membrane, vacuole 19.3 22.22
KXG20919 Sorghum plastid 25.87 15.12
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1UniProt:A0A194YIP1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150
GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908EnsemblPlants:KXG19818
ProteinID:KXG19818ProteinID:KXG19818.1InterPro:LolPIPFAM:PF01357PFAM:PF03330PRINTS:PR00829
PRINTS:PR01225PFscan:PS50842PFscan:PS50843PFscan:PS51257PANTHER:PTHR31692PANTHER:PTHR31692:SF27
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837EnsemblPlantsGene:SORBI_3010G121800SUPFAM:SSF49590SUPFAM:SSF50685
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001FCCDA9:::
Description
hypothetical protein
Coordinates
chr10:-:14150586..14152163
Molecular Weight (calculated)
26759.4 Da
IEP (calculated)
7.191
GRAVY (calculated)
-0.047
Length
259 amino acids
Sequence
(BLAST)
001: MGSKQQIGVV VVLSCFIAIS ALAFRPCAAW SDAGATWYGP ANGAGSDGGA CGYQGAVHQP PFSSMITAGS NSIYQDGKGC GTCYQVKCTG HQSCSGSPVT
101: VVLTDQCPGA CQSEPVHFDL SGTAFGAMAK PGQADQLRNV GRLPVQYTRV PCNWNGVDVA FRVDAGSNAN YLAMAIEYEA GDGDLRAVEL QNGAAAWAPM
201: ERSWGAVWRY QSSGSSLQAA PLSVRLTSGS GKTLVASGVI PAGWQPGNTY RSVVNFGGN
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.