Factsheet for GSMUA_AchrUn_randomP23770_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P13740_001	Banana	extracellular	69.7	70.23
GSMUA_Achr2P13730_001	Banana	extracellular	69.7	70.23
GSMUA_AchrUn_...	Banana	extracellular	23.86	68.48
GSMUA_Achr2P13750_001	Banana	extracellular	66.29	67.05
HORVU2Hr1G013380.1	Barley	cytosol, extracellular, mitochondrion	56.82	63.29
Os05t0246300-01	Rice	extracellular	62.5	62.5
TraesCS2D01G078900.1	Wheat	extracellular	59.85	62.2
GSMUA_Achr2P11930_001	Banana	extracellular	38.26	61.96
TraesCS2B01G095600.1	Wheat	extracellular	59.85	61.96
TraesCS2A01G413600.1	Wheat	extracellular	61.36	61.83
Os04t0552000-00	Rice	extracellular	61.74	61.74
TraesCS2D01G411000.1	Wheat	extracellular	60.98	61.45
TraesCS2A01G081200.1	Wheat	extracellular	59.09	61.42
EES11234	Sorghum	extracellular	60.61	60.84
HORVU2Hr1G013360.1	Barley	extracellular	57.58	60.56
TraesCS2A01G080800.1	Wheat	extracellular	57.95	60.24
TraesCS2A01G580300.1	Wheat	extracellular	56.44	59.84
TraesCS2D01G592900.1	Wheat	extracellular	56.44	59.84
TraesCS2B01G607400.1	Wheat	extracellular	56.06	59.44
TraesCS2A01G580200.1	Wheat	extracellular	56.44	59.36
HORVU0Hr1G016380.2	Barley	extracellular	59.47	59.25
Zm00001d026170_P001	Maize	extracellular	58.71	59.16
TraesCS2B01G432300.1	Wheat	plastid	58.71	59.16
TraesCSU01G009600.1	Wheat	extracellular	56.44	58.89
GSMUA_Achr4P26910_001	Banana	extracellular	60.61	58.82
Zm00001d017493_P001	Maize	extracellular	59.47	58.8
GSMUA_Achr7P07040_001	Banana	extracellular	62.5	58.72
KXG19818	Sorghum	extracellular	57.58	58.69
TraesCS6A01G249700.1	Wheat	extracellular	59.09	58.65
TraesCS2B01G095700.1	Wheat	extracellular	55.68	58.33
EES07509	Sorghum	extracellular	58.33	58.33
Os02t0658600-00	Rice	plastid	60.23	58.24
TraesCS6A01G249400.2	Wheat	extracellular	58.33	58.11
EER88254	Sorghum	extracellular	56.82	57.92
TraesCS6D01G231400.1	Wheat	extracellular	57.95	57.52
TraesCS2D01G078800.1	Wheat	extracellular	55.3	57.48
TraesCS2D01G104800.1	Wheat	extracellular	54.92	57.09
TraesCS2B01G122100.1	Wheat	extracellular	41.29	57.07
Zm00001d045861_P001	Maize	mitochondrion	57.2	56.98
TraesCS2D01G078600.1	Wheat	extracellular	51.14	56.49
Zm00001d051368_P001	Maize	extracellular	33.71	56.33
GSMUA_AchrUn_...	Banana	extracellular	38.26	56.11
Zm00001d045792_P001	Maize	extracellular	57.2	55.93
HORVU2Hr1G097480.1	Barley	extracellular	59.85	55.83
TraesCS2A01G105200.1	Wheat	extracellular	53.03	55.12
HORVU2Hr1G013340.1	Barley	extracellular	54.17	48.97
TraesCS5D01G384200.1	Wheat	extracellular	55.3	47.4
TraesCS5B01G376500.1	Wheat	extracellular	55.3	47.25
EER93754	Sorghum	extracellular	51.89	44.77
Os03t0645000-00	Rice	mitochondrion	51.89	43.77
KXG37946	Sorghum	extracellular	53.79	43.69
GSMUA_AchrUn_...	Banana	extracellular	42.42	42.59
GSMUA_Achr5P12080_001	Banana	extracellular	42.8	42.32
GSMUA_Achr1P00120_001	Banana	extracellular	41.29	40.98
HORVU5Hr1G092910.9	Barley	plastid	54.92	35.02
GSMUA_Achr11P...	Banana	extracellular	32.95	34.25
GSMUA_AchrUn_...	Banana	extracellular	31.82	33.07
GSMUA_Achr5P11590_001	Banana	extracellular	30.68	31.03
GSMUA_Achr11P...	Banana	extracellular	30.68	30.45
GSMUA_AchrUn_...	Banana	extracellular	21.59	30.32
GSMUA_Achr5P19030_001	Banana	extracellular	28.79	28.79
GSMUA_Achr11P...	Banana	extracellular	28.03	27.92
GSMUA_Achr1P02170_001	Banana	extracellular, peroxisome, plastid	30.68	26.38
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	29.55	24.45
Zm00001d033231_P003	Maize	extracellular	52.27	19.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
EnsemblPlantsGene:GSMUA_AchrUn_randomG23770_001	EnsemblPlants:GSMUA_AchrUn_randomP23770_001	EnsemblPlants:GSMUA_AchrUn_randomT23770_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	InterPro:LolPI	UniProt:M0UBT5	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829
PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF3	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002962FA7
SEG:seg	:	:	:	:	:

Description

Expansin-B18 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23770_001]

Coordinates

chrchrUn_random:+:116954487..116955526

Molecular Weight (calculated)

27483.4 Da

IEP (calculated)

7.567

GRAVY (calculated)

0.114

Length

264 amino acids

Sequence
(BLAST)

001: MATSSSSFRR LSSLLLFVGF LSLLRPCACY RRIFLNSSAV ATWYGSPGGA GSDGGACGYG DAVSKPPFSS FIAAGGPSLF KSGMGCGACY QVACTSNGAC
101: SGNPVTVVIT DECPGGPCAS DPVHFDLSGT AFGAMAKPGQ ADALRNVGSL QIQYSRVHCK YSSVNISFKM DAGSNPYYFA VVIEFEDGDG DLSAVDVQQA
201: GSGFWIPTQQ SWGAVWKLNS GWPLQAPLSI RLTSGLSGKT LVATNVIPVD WKPGATYNST VNFP

Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)

001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF

Arabidopsis Description

EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.