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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • extracellular 3
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER93754 Sorghum extracellular 64.0 67.97
TraesCS5B01G376500.1 Wheat extracellular 63.08 66.34
EES11234 Sorghum extracellular 53.54 66.16
TraesCS5D01G384200.1 Wheat extracellular 62.46 65.91
EES07509 Sorghum extracellular 50.15 61.74
Os03t0645000-00 Rice mitochondrion 58.46 60.7
KXG19818 Sorghum extracellular 46.15 57.92
EER88254 Sorghum extracellular 46.15 57.92
VIT_15s0021g02670.t01 Wine grape extracellular 46.15 54.95
VIT_15s0021g02700.t01 Wine grape extracellular 45.23 53.85
GSMUA_AchrUn_... Banana extracellular 43.69 53.79
Solyc01g090810.2.1 Tomato extracellular 44.62 52.73
KRG88934 Soybean extracellular, vacuole 44.31 51.99
KRH75302 Soybean extracellular 44.31 51.99
GSMUA_Achr4P26910_001 Banana extracellular 43.38 51.84
KRH33426 Soybean extracellular 41.85 50.0
HORVU5Hr1G092910.9 Barley plastid 63.08 49.52
PGSC0003DMT400048506 Potato plastid 29.54 49.48
EES11235 Sorghum extracellular 44.31 49.48
CDY18948 Canola extracellular 29.54 49.23
EES05780 Sorghum extracellular 44.31 48.81
CDY72345 Canola cytosol 36.62 48.77
KRH33423 Soybean extracellular 41.54 48.74
EES07508 Sorghum extracellular 44.0 48.64
CDY18950 Canola cytosol, extracellular, plastid 35.38 48.52
CDY70406 Canola extracellular 40.62 48.18
CDX74710 Canola extracellular 40.62 48.18
Bra004889.1-P Field mustard extracellular 40.62 48.0
CDX74711 Canola extracellular 38.46 47.89
AT2G45110.1 Thale cress extracellular 38.15 47.88
EES11233 Sorghum extracellular 42.15 47.57
CDY72655 Canola cytosol, plastid 24.62 47.34
CDX83404 Canola extracellular 37.54 47.1
Bra000370.1-P Field mustard extracellular 37.54 47.1
EER91942 Sorghum extracellular 38.46 46.99
CDY18951 Canola extracellular 39.69 46.91
Solyc10g018500.1.1 Tomato extracellular 37.85 46.42
VIT_09s0002g08510.t01 Wine grape extracellular 39.69 46.24
Bra035987.1-P Field mustard extracellular 37.54 46.04
CDY14888 Canola extracellular 37.54 46.04
CDY18946 Canola extracellular 37.54 45.86
CDX96901 Canola extracellular 37.23 45.66
AT1G65681.1 Thale cress cytosol 31.08 45.29
AT1G65680.1 Thale cress extracellular 37.85 45.05
CDY72505 Canola cytosol 22.15 45.0
EER94506 Sorghum extracellular 38.46 44.33
EER91949 Sorghum extracellular 38.46 44.33
EER98447 Sorghum extracellular 41.54 43.97
EER98449 Sorghum extracellular 42.15 43.91
KRH65410 Soybean extracellular 35.38 43.07
OQU93456 Sorghum cytosol, extracellular 27.69 42.45
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 16.92 42.31
Solyc01g090820.1.1 Tomato extracellular 33.23 42.02
CDX95627 Canola extracellular 36.0 41.94
OQU92157 Sorghum extracellular 39.69 41.88
Solyc03g093390.2.1 Tomato extracellular, nucleus 36.62 41.75
EER91945 Sorghum extracellular 35.38 41.67
EER94537 Sorghum extracellular 33.85 41.35
KXG38972 Sorghum extracellular 33.85 41.35
KXG38969 Sorghum extracellular 33.85 41.35
EER91947 Sorghum extracellular 34.15 41.26
KXG40417 Sorghum mitochondrion 37.23 40.74
EER94500 Sorghum extracellular 36.0 40.34
Solyc05g052330.1.1 Tomato extracellular 33.23 40.3
Solyc07g049540.1.1 Tomato extracellular 31.69 40.08
Bra004890.1-P Field mustard extracellular 39.08 39.94
EES05315 Sorghum extracellular 39.08 39.94
OQU93455 Sorghum extracellular 31.38 39.84
KXG38933 Sorghum mitochondrion 38.77 39.5
KXG40416 Sorghum extracellular, vacuole 38.15 38.75
OQU93459 Sorghum extracellular 31.69 38.72
Bra004891.1-P Field mustard cytosol, nucleus, plastid 16.31 38.41
EER95684 Sorghum extracellular 31.38 38.35
OQU92156 Sorghum plastid 38.15 38.15
EER95683 Sorghum extracellular 31.08 37.97
OQU93457 Sorghum extracellular 31.08 37.97
OQU93458 Sorghum extracellular 31.08 37.97
PGSC0003DMT400095086 Potato plastid 28.92 37.6
CDX74713 Canola extracellular 39.08 37.03
AT3G60570.1 Thale cress extracellular 29.85 36.74
EER91948 Sorghum extracellular 31.38 36.69
CDX67835 Canola extracellular 29.23 35.71
Bra003421.1-P Field mustard extracellular 29.23 35.71
EES05488 Sorghum extracellular 29.54 35.16
CDY71186 Canola extracellular 29.23 35.06
Bra014484.1-P Field mustard extracellular 32.92 29.72
CDY48362 Canola extracellular 32.62 29.69
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 39.08 27.67
EER95568 Sorghum extracellular 22.46 27.04
EER99370 Sorghum extracellular 22.77 27.01
KXG38992 Sorghum extracellular 20.31 23.4
OQU89980 Sorghum extracellular, plasma membrane, vacuole 14.46 20.89
KXG20919 Sorghum plastid 21.23 15.58
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1UniProt:A0A1B6QJ49InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBDInterPro:Expansin_CBD_sfGO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0019953InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749
InterPro:IPR036908ProteinID:KXG37945.1EnsemblPlants:KXG37946ProteinID:KXG37946ProteinID:KXG37946.1InterPro:LolPI
ProteinID:OQU91274.1PFAM:PF01357PFAM:PF03330PRINTS:PR00829PRINTS:PR01225PFscan:PS50842
PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF14InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837
EnsemblPlantsGene:SORBI_3001G155600SUPFAM:SSF49590SUPFAM:SSF50685TMHMM:TMhelixUniParc:UPI00081AB297SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:12595945..12599781
Molecular Weight (calculated)
34232.5 Da
IEP (calculated)
4.735
GRAVY (calculated)
0.095
Length
325 amino acids
Sequence
(BLAST)
001: MLCCAVGEQR KTDSQSTVVS KSGRVCCCMA STLQLLFSIA ITALAFFLHP CASTEFRREL YGWSNGIATW YGAADGAGTD GGACGYQNAV DQPPFSSMIA
101: AGCSSIYDSG KGCGSCYQVV CTGNEACSGN PVTVVITDEC PDCPCPDDQV HLDMSGTAFG ALAKPGQESQ LRGAGAIQIQ YTRVQCEWPG VDVTFSVESG
201: SNPNYLAVLI EYEDSDSDLY SVDIMQQGQG GTTGQWVPMQ QSWGAVWKIN SGAVLQGPFN IRLTFSSGRV LVAGNAIPAG WNAGVAYRSG GVAVARARPR
301: SGVCRRYEAA GALHLFVLSV VLLML
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.