Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72345 | Canola | cytosol | 89.85 | 97.95 |
| CDX74711 | Canola | extracellular | 95.49 | 97.32 |
| CDY18950 | Canola | cytosol, extracellular, plastid | 84.96 | 95.36 |
| Bra004891.1-P | Field mustard | cytosol, nucleus, plastid | 42.48 | 81.88 |
| CDX83404 | Canola | extracellular | 77.82 | 79.92 |
| AT2G45110.1 | Thale cress | extracellular | 75.19 | 77.22 |
| CDY72505 | Canola | cytosol | 43.98 | 73.12 |
| AT1G65681.1 | Thale cress | cytosol | 59.77 | 71.3 |
| CDY72655 | Canola | cytosol, plastid | 45.11 | 71.01 |
| CDX96901 | Canola | extracellular | 70.68 | 70.94 |
| CDX95627 | Canola | extracellular | 73.68 | 70.25 |
| CDY14888 | Canola | extracellular | 69.92 | 70.19 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 49.25 | 55.27 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 51.13 | 54.18 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 51.88 | 54.12 |
| TraesCSU01G009600.1 | Wheat | extracellular | 51.13 | 53.75 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 51.13 | 53.54 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 51.13 | 53.54 |
| Zm00001d051368_P001 | Maize | extracellular | 31.58 | 53.16 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 49.25 | 52.61 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 50.0 | 52.36 |
| EES07509 | Sorghum | extracellular | 51.88 | 52.27 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 48.87 | 52.21 |
| Zm00001d017493_P001 | Maize | extracellular | 51.88 | 51.69 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 48.87 | 51.59 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 49.25 | 51.57 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 48.12 | 51.41 |
| KXG19818 | Sorghum | extracellular | 50.0 | 51.35 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 51.13 | 51.32 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 48.12 | 51.0 |
| EER88254 | Sorghum | extracellular | 49.62 | 50.97 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 48.5 | 50.79 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 50.0 | 50.76 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 50.38 | 50.38 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 36.09 | 50.26 |
| Zm00001d045861_P001 | Maize | mitochondrion | 50.0 | 50.19 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 50.0 | 50.0 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 49.25 | 50.0 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 49.62 | 49.81 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 48.87 | 49.81 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 44.74 | 49.79 |
| Os04t0552000-00 | Rice | extracellular | 49.25 | 49.62 |
| Zm00001d026170_P001 | Maize | extracellular | 48.87 | 49.62 |
| Zm00001d045792_P001 | Maize | extracellular | 50.0 | 49.26 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 48.5 | 49.24 |
| TraesCS2B01G432300.1 | Wheat | plastid | 48.5 | 49.24 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 46.99 | 49.21 |
| Solyc10g018500.1.1 | Tomato | extracellular | 48.87 | 49.06 |
| CDX67835 | Canola | extracellular | 48.87 | 48.87 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 47.74 | 48.47 |
| Os02t0658600-00 | Rice | plastid | 49.62 | 48.35 |
| CDY71186 | Canola | extracellular | 49.25 | 48.34 |
| Os05t0246300-01 | Rice | extracellular | 47.74 | 48.11 |
| EES11234 | Sorghum | extracellular | 47.37 | 47.91 |
| CDY18948 | Canola | extracellular | 34.59 | 47.18 |
| CDY70406 | Canola | extracellular | 47.74 | 46.35 |
| Solyc01g090820.1.1 | Tomato | extracellular | 44.74 | 46.3 |
| CDX74710 | Canola | extracellular | 47.37 | 45.99 |
| CDY18951 | Canola | extracellular | 46.99 | 45.45 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 48.12 | 45.23 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 48.12 | 43.84 |
| Solyc07g049540.1.1 | Tomato | extracellular | 42.11 | 43.58 |
| PGSC0003DMT400030395 | Potato | cytosol, extracellular, mitochondrion, nucleus | 20.3 | 41.54 |
| Solyc05g052330.1.1 | Tomato | extracellular | 41.73 | 41.42 |
| GSMUA_AchrUn_... | Banana | extracellular | 27.82 | 41.11 |
| CDY18990 | Canola | extracellular | 40.6 | 40.75 |
| CDY05789 | Canola | extracellular | 39.47 | 39.62 |
| CDY31940 | Canola | extracellular | 39.1 | 39.25 |
| PGSC0003DMT400095086 | Potato | plastid | 36.84 | 39.2 |
| CDY70556 | Canola | extracellular | 38.72 | 38.87 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 44.74 | 38.51 |
| CDY58728 | Canola | extracellular | 38.35 | 38.49 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 44.36 | 38.31 |
| KXG37946 | Sorghum | extracellular | 45.86 | 37.54 |
| EER93754 | Sorghum | extracellular | 42.86 | 37.25 |
| Os03t0645000-00 | Rice | mitochondrion | 43.23 | 36.74 |
| CDY48362 | Canola | extracellular | 46.99 | 35.01 |
| CDX74713 | Canola | extracellular | 45.11 | 34.99 |
| CDY42954 | Canola | extracellular | 27.44 | 29.2 |
| CDY65447 | Canola | extracellular | 27.07 | 28.8 |
| CDY35606 | Canola | extracellular | 27.07 | 28.8 |
| CDY09659 | Canola | plasma membrane | 27.07 | 28.8 |
| HORVU5Hr1G092910.9 | Barley | plastid | 43.98 | 28.26 |
| CDX90493 | Canola | cytosol, extracellular, nucleus | 13.16 | 26.72 |
| CDY69288 | Canola | extracellular | 25.56 | 25.76 |
| CDY52801 | Canola | extracellular | 25.56 | 25.28 |
| CDY61895 | Canola | extracellular | 25.19 | 24.91 |
| CDY72634 | Canola | extracellular | 24.81 | 24.91 |
| CDY64278 | Canola | extracellular | 24.81 | 24.91 |
| Zm00001d033231_P003 | Maize | extracellular | 42.11 | 15.69 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | GO:A0A078G0Y7 | UniProt:A0A078G0Y7 | EnsemblPlants:CDY18946 |
| ProteinID:CDY18946 | ProteinID:CDY18946.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0019953 | EnsemblPlantsGene:GSBRNA2T00006157001 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 |
| PANTHER:PTHR31692:SF3 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | UniParc:UPI0000F35E47 | SEG:seg | : | : | : |
Description
BnaC04g04040DBnaC04g04040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G0Y7]
Coordinates
chrLK032090:-:549151..550535
Molecular Weight (calculated)
27976.2 Da
IEP (calculated)
5.712
GRAVY (calculated)
-0.012
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MTPFHKCFAL LALFAASFKF CYCQNETINA AGWADADAGA TWYGEPEGAG STGRACGYGV AVANPPLYAM VSAGGPSLFN NGKGCGTCYQ IMCTGNPACS
101: GSPITVTITD ECPGGPCVSE PVHFDLSRKA MGALAKPGQA AQLRSAGPLS VSYRRAACLY QGTEIAFHVD AGSTPFYVAF VVEYENGEGD LASVEIQPAS
201: GGFMPKGFMP MQEMRSAEWK LNSGGPLSGP FNIRLTSGES RKVVVAQAVI PADWKPDQTY RSIVNF
101: GSPITVTITD ECPGGPCVSE PVHFDLSRKA MGALAKPGQA AQLRSAGPLS VSYRRAACLY QGTEIAFHVD AGSTPFYVAF VVEYENGEGD LASVEIQPAS
201: GGFMPKGFMP MQEMRSAEWK LNSGGPLSGP FNIRLTSGES RKVVVAQAVI PADWKPDQTY RSIVNF
001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF
Arabidopsis Description
EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.