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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 10
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G384200.1 Wheat extracellular 71.9 71.43
TraesCS5B01G376500.1 Wheat extracellular 71.24 70.55
EES11234 Sorghum extracellular 57.19 66.54
Os03t0645000-00 Rice mitochondrion 67.97 66.45
KXG37946 Sorghum extracellular 67.97 64.0
EES07509 Sorghum extracellular 51.31 59.47
EER88254 Sorghum extracellular 49.67 58.69
KXG19818 Sorghum extracellular 49.67 58.69
VIT_15s0021g02670.t01 Wine grape extracellular 48.69 54.58
VIT_15s0021g02700.t01 Wine grape extracellular 47.71 53.48
Solyc01g090810.2.1 Tomato extracellular 48.04 53.45
HORVU5Hr1G092910.9 Barley plastid 70.59 52.17
GSMUA_AchrUn_... Banana extracellular 44.77 51.89
EES05780 Sorghum extracellular 49.02 50.85
GSMUA_Achr4P26910_001 Banana extracellular 44.77 50.37
PGSC0003DMT400048506 Potato plastid 31.37 49.48
EES07508 Sorghum extracellular 47.39 49.32
EES11235 Sorghum extracellular 46.73 49.14
KRH75302 Soybean extracellular 44.44 49.1
EES11233 Sorghum extracellular 46.08 48.96
KRG88934 Soybean extracellular, vacuole 44.12 48.74
KRH33426 Soybean extracellular 42.48 47.79
CDY18948 Canola extracellular 30.39 47.69
KRH33423 Soybean extracellular 42.81 47.29
EER98447 Sorghum extracellular 47.39 47.23
CDY18950 Canola cytosol, extracellular, plastid 35.95 46.41
CDY18951 Canola extracellular 41.5 46.18
EER91942 Sorghum extracellular 39.87 45.86
EER98449 Sorghum extracellular 46.73 45.83
CDX74710 Canola extracellular 40.85 45.62
CDY72655 Canola cytosol, plastid 25.16 45.56
CDY72345 Canola cytosol 36.27 45.49
Bra004889.1-P Field mustard extracellular 40.85 45.45
CDY70406 Canola extracellular 40.52 45.26
AT2G45110.1 Thale cress extracellular 37.91 44.79
CDX74711 Canola extracellular 37.91 44.44
CDY14888 Canola extracellular 38.24 44.15
Bra035987.1-P Field mustard extracellular 38.24 44.15
AT1G65680.1 Thale cress extracellular 39.22 43.96
CDX96901 Canola extracellular 37.91 43.77
CDX83404 Canola extracellular 36.93 43.63
Bra000370.1-P Field mustard extracellular 36.93 43.63
Solyc10g018500.1.1 Tomato extracellular 37.58 43.4
EER94506 Sorghum extracellular 39.87 43.26
EER91949 Sorghum extracellular 39.87 43.26
CDY72505 Canola cytosol 22.55 43.12
AT1G65681.1 Thale cress cytosol 31.37 43.05
VIT_09s0002g08510.t01 Wine grape extracellular 39.22 43.01
CDY18946 Canola extracellular 37.25 42.86
Solyc03g093390.2.1 Tomato extracellular, nucleus 39.87 42.81
OQU93456 Sorghum cytosol, extracellular 29.41 42.45
KRH65410 Soybean extracellular 36.93 42.32
EER91947 Sorghum extracellular 36.6 41.64
Solyc01g090820.1.1 Tomato extracellular 34.64 41.25
EER91945 Sorghum extracellular 36.93 40.94
OQU92157 Sorghum extracellular 40.52 40.26
Zm00001d033231_P003 Maize extracellular 93.79 40.2
KXG38969 Sorghum extracellular 34.31 39.47
KXG40417 Sorghum mitochondrion 38.24 39.39
EER94537 Sorghum extracellular 33.99 39.1
KXG38972 Sorghum extracellular 33.99 39.1
CDX95627 Canola extracellular 35.62 39.07
OQU93455 Sorghum extracellular 32.68 39.06
Bra004890.1-P Field mustard extracellular 40.52 38.99
EES05315 Sorghum extracellular 40.52 38.99
KXG38933 Sorghum mitochondrion 40.2 38.56
EER95683 Sorghum extracellular 32.68 37.59
OQU93459 Sorghum extracellular 32.68 37.59
OQU93458 Sorghum extracellular 32.68 37.59
OQU93457 Sorghum extracellular 32.68 37.59
OQU92156 Sorghum plastid 39.87 37.54
Solyc07g049540.1.1 Tomato extracellular 31.37 37.35
EER94500 Sorghum extracellular 35.29 37.24
EER95684 Sorghum extracellular 32.35 37.22
EER91948 Sorghum extracellular 33.66 37.05
PGSC0003DMT400030395 Potato cytosol, extracellular, mitochondrion, nucleus 15.69 36.92
KXG40416 Sorghum extracellular, vacuole 38.56 36.88
Solyc05g052330.1.1 Tomato extracellular 32.03 36.57
CDX74713 Canola extracellular 40.52 36.15
AT3G60570.1 Thale cress extracellular 30.72 35.61
Bra004891.1-P Field mustard cytosol, nucleus, plastid 16.01 35.51
EES05488 Sorghum extracellular 31.05 34.8
PGSC0003DMT400095086 Potato plastid 28.1 34.4
CDY71186 Canola extracellular 30.39 34.32
CDX67835 Canola extracellular 29.74 34.21
Bra003421.1-P Field mustard extracellular 29.74 34.21
PGSC0003DMT400066943 Potato cytosol, plastid, vacuole 43.14 28.76
CDY48362 Canola extracellular 32.68 28.01
Bra014484.1-P Field mustard extracellular 32.68 27.78
EER95568 Sorghum extracellular 24.18 27.41
EER99370 Sorghum extracellular 23.53 26.28
KXG38992 Sorghum extracellular 21.9 23.76
OQU89980 Sorghum extracellular, plasma membrane, vacuole 15.36 20.89
KXG20919 Sorghum plastid 21.57 14.9
Protein Annotations
Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:35.1EntrezGene:8057242UniProt:C5WR70EnsemblPlants:EER93754
ProteinID:EER93754ProteinID:EER93754.1InterPro:Expan_Lol_pIInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBDInterPro:Expansin_CBD_sf
GO:GO:0000003GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0019953InterPro:IPR007112
InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908InterPro:LolPIPFAM:PF01357PFAM:PF03330
PRINTS:PR00829PRINTS:PR01225PFscan:PS50842PFscan:PS50843PANTHER:PTHR31692PANTHER:PTHR31692:SF14
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837EnsemblPlantsGene:SORBI_3001G155700SUPFAM:SSF49590SUPFAM:SSF50685
SignalP:SignalP-noTMUniParc:UPI0001A82B71RefSeq:XP_002466756.1:::
Description
hypothetical protein
Coordinates
chr1:-:12601267..12605527
Molecular Weight (calculated)
32128.0 Da
IEP (calculated)
5.453
GRAVY (calculated)
0.147
Length
306 amino acids
Sequence
(BLAST)
001: MASKIQLLSS IAILAFASHL HPCVSIEFRH ELSSWTTGIA TWYGDANGAG SEGGACGYQY AVDQPPFSSL IAAGSPFIYD SGNGCGSCYQ VVCSSNQACS
101: GYPVTVVITD QGPGGGPCLS QASDGMCLNE GAHFDMSGTA FGAMAKPGMA DQLRAAGLLQ IQYTRVQCEW PGVDVTFSVD SGSNPNYLAV LIEYEDSESD
201: LSAVDIMQNS AGQWVPMQHS WGAIWRLDSG SALHGPFHLR LTFSSGRVLI ASNAIPAGWT PGVAYRAGGV AVTRARPRSG GGRIHEAAGT FSSLVYHLLM
301: FVVLVL
Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.