Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 10
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048506 | Potato | plastid | 63.51 | 93.3 |
| VIT_09s0002g08510.t01 | Wine grape | extracellular | 67.72 | 69.18 |
| Solyc01g090810.2.1 | Tomato | extracellular | 56.49 | 58.55 |
| HORVU2Hr1G013380.1 | Barley | cytosol, extracellular, mitochondrion | 47.37 | 56.96 |
| Os04t0552000-00 | Rice | extracellular | 49.82 | 53.79 |
| KRH33426 | Soybean | extracellular | 51.23 | 53.68 |
| TraesCS2D01G078900.1 | Wheat | extracellular | 47.72 | 53.54 |
| HORVU2Hr1G013360.1 | Barley | extracellular | 47.02 | 53.39 |
| EES11234 | Sorghum | extracellular | 49.12 | 53.23 |
| Zm00001d026170_P001 | Maize | extracellular | 48.77 | 53.05 |
| TraesCS2D01G411000.1 | Wheat | extracellular | 48.42 | 52.67 |
| Os05t0246300-01 | Rice | extracellular | 48.77 | 52.65 |
| TraesCS2A01G580300.1 | Wheat | extracellular | 45.96 | 52.61 |
| TraesCS2A01G580200.1 | Wheat | extracellular | 46.32 | 52.59 |
| KRH33423 | Soybean | extracellular | 50.88 | 52.35 |
| TraesCS2A01G413600.1 | Wheat | extracellular | 48.07 | 52.29 |
| TraesCS2D01G592900.1 | Wheat | extracellular | 45.61 | 52.21 |
| TraesCS2B01G607400.1 | Wheat | extracellular | 45.61 | 52.21 |
| KRH75302 | Soybean | extracellular | 50.53 | 51.99 |
| TraesCS2A01G081200.1 | Wheat | extracellular | 46.32 | 51.97 |
| TraesCS2B01G432300.1 | Wheat | plastid | 47.72 | 51.91 |
| HORVU0Hr1G016380.2 | Barley | extracellular | 48.07 | 51.7 |
| GSMUA_Achr2P13730_001 | Banana | extracellular | 47.37 | 51.53 |
| TraesCS2B01G095600.1 | Wheat | extracellular | 45.96 | 51.37 |
| TraesCS6A01G249400.2 | Wheat | extracellular | 47.72 | 51.32 |
| TraesCS2D01G078800.1 | Wheat | extracellular | 45.61 | 51.18 |
| GSMUA_Achr2P13740_001 | Banana | extracellular | 47.02 | 51.15 |
| TraesCSU01G009600.1 | Wheat | extracellular | 45.26 | 50.99 |
| Zm00001d045861_P001 | Maize | mitochondrion | 47.37 | 50.94 |
| TraesCS2B01G095700.1 | Wheat | extracellular | 44.91 | 50.79 |
| TraesCS2D01G104800.1 | Wheat | extracellular | 45.26 | 50.79 |
| TraesCS2A01G080800.1 | Wheat | extracellular | 45.26 | 50.79 |
| TraesCS6D01G231400.1 | Wheat | extracellular | 47.37 | 50.75 |
| KRG88934 | Soybean | extracellular, vacuole | 49.12 | 50.54 |
| TraesCS6A01G249700.1 | Wheat | extracellular | 47.02 | 50.38 |
| Zm00001d045792_P001 | Maize | extracellular | 47.72 | 50.37 |
| Zm00001d017493_P001 | Maize | extracellular | 47.02 | 50.19 |
| EES07509 | Sorghum | extracellular | 46.32 | 50.0 |
| KXG19818 | Sorghum | extracellular | 45.26 | 49.81 |
| TraesCS2D01G078600.1 | Wheat | extracellular | 41.75 | 49.79 |
| EER88254 | Sorghum | extracellular | 44.91 | 49.42 |
| TraesCS2B01G122100.1 | Wheat | extracellular | 32.98 | 49.21 |
| GSMUA_Achr2P13750_001 | Banana | extracellular | 44.91 | 49.04 |
| HORVU2Hr1G097480.1 | Barley | extracellular | 48.42 | 48.76 |
| KRH65410 | Soybean | extracellular | 45.61 | 48.69 |
| TraesCS2A01G105200.1 | Wheat | extracellular | 42.81 | 48.03 |
| Solyc10g018500.1.1 | Tomato | extracellular | 44.56 | 47.92 |
| Os02t0658600-00 | Rice | plastid | 45.61 | 47.62 |
| Zm00001d051368_P001 | Maize | extracellular | 25.96 | 46.84 |
| GSMUA_AchrUn_... | Banana | extracellular | 29.47 | 46.67 |
| Solyc01g090820.1.1 | Tomato | extracellular | 40.7 | 45.14 |
| Solyc05g052330.1.1 | Tomato | extracellular | 39.3 | 41.79 |
| Solyc07g054170.2.1 | Tomato | extracellular | 38.6 | 41.2 |
| Solyc07g049540.1.1 | Tomato | extracellular | 36.84 | 40.86 |
| HORVU2Hr1G013340.1 | Barley | extracellular | 41.75 | 40.75 |
| TraesCS5D01G384200.1 | Wheat | extracellular | 43.16 | 39.94 |
| EER93754 | Sorghum | extracellular | 42.81 | 39.87 |
| TraesCS5B01G376500.1 | Wheat | extracellular | 43.16 | 39.81 |
| Solyc10g008440.2.1 | Tomato | extracellular | 36.14 | 39.31 |
| Os03t0645000-00 | Rice | mitochondrion | 41.75 | 38.02 |
| KXG37946 | Sorghum | extracellular | 41.75 | 36.62 |
| Solyc08g077910.2.1 | Tomato | extracellular | 27.37 | 31.08 |
| Solyc08g077330.2.1 | Tomato | extracellular | 27.72 | 30.98 |
| Solyc06g060970.1.1 | Tomato | extracellular | 26.32 | 30.24 |
| Solyc08g077900.2.1 | Tomato | extracellular | 26.32 | 29.64 |
| HORVU5Hr1G092910.9 | Barley | plastid | 42.81 | 29.47 |
| Solyc01g112000.2.1 | Tomato | extracellular | 22.81 | 24.9 |
| Zm00001d033231_P003 | Maize | extracellular | 42.11 | 16.81 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| UniProt:K4BIL6 | InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 |
| PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF49 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | EnsemblPlantsGene:Solyc03g093390.2 | EnsemblPlants:Solyc03g093390.2.1 | TMHMM:TMhelix |
| UniParc:UPI00027690D4 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:54655132..54656997
Molecular Weight (calculated)
31027.0 Da
IEP (calculated)
9.079
GRAVY (calculated)
-0.151
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLDISHLV IFSHLIIVLV CFICPSFGYK PKHFNLSTHA THWGTAGATW YGSPHGAGSD GGSCGYGSAV SEAPLSSFVT GIGPSLYKSG KECGACYQVK
101: CTKKMHRSCS GKGVRVVITD FCPGGPCVAQ SAHFDLSGTA FGAMAIPGQE QKLRDAGVLQ IRYARVACDY SRKNIVFHVD QGSNSEYFAV VIEFEQGDGD
201: LAKVELKEKR SSSIISRGNK NNYKWRQMQQ SWGAVWKLDA GSKLHPPFSI RLTSQYSDQI LIANNVIPTG WQPGATYRSL VNYRV
101: CTKKMHRSCS GKGVRVVITD FCPGGPCVAQ SAHFDLSGTA FGAMAIPGQE QKLRDAGVLQ IRYARVACDY SRKNIVFHVD QGSNSEYFAV VIEFEQGDGD
201: LAKVELKEKR SSSIISRGNK NNYKWRQMQQ SWGAVWKLDA GSKLHPPFSI RLTSQYSDQI LIANNVIPTG WQPGATYRSL VNYRV
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.