Factsheet for TraesCS5D01G384200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G376500.1	Wheat	extracellular	98.05	97.73
Os03t0645000-00	Rice	mitochondrion	76.95	75.72
EER93754	Sorghum	extracellular	71.43	71.9
HORVU5Hr1G092910.9	Barley	plastid	94.81	70.53
TraesCS2D01G411000.1	Wheat	extracellular	57.79	67.94
TraesCS2D01G078900.1	Wheat	extracellular	51.62	62.6
KXG37946	Sorghum	extracellular	65.91	62.46
TraesCS6D01G231400.1	Wheat	extracellular	53.57	62.03
TraesCS2D01G592900.1	Wheat	extracellular	49.68	61.45
TraesCS2D01G078800.1	Wheat	extracellular	47.4	57.48
TraesCS2D01G104800.1	Wheat	extracellular	46.75	56.69
Solyc01g090810.2.1	Tomato	extracellular	49.68	55.64
GSMUA_AchrUn_...	Banana	extracellular	47.4	55.3
TraesCS2D01G078600.1	Wheat	extracellular	42.86	55.23
VIT_15s0021g02670.t01	Wine grape	extracellular	48.7	54.95
TraesCS2D01G411200.1	Wheat	extracellular	46.1	54.41
VIT_15s0021g02700.t01	Wine grape	extracellular	47.73	53.85
TraesCS2D01G411100.1	Wheat	extracellular, plastid	48.38	53.02
TraesCS6D01G231200.1	Wheat	extracellular	47.73	51.22
GSMUA_Achr4P26910_001	Banana	extracellular	45.13	51.1
PGSC0003DMT400048506	Potato	plastid	32.14	51.03
KRH75302	Soybean	extracellular	45.45	50.54
KRG88934	Soybean	extracellular, vacuole	45.45	50.54
KRH33426	Soybean	extracellular	44.16	50.0
CDY72655	Canola	cytosol, plastid	26.95	49.11
CDY18950	Canola	cytosol, extracellular, plastid	37.66	48.95
CDY18948	Canola	extracellular	30.84	48.72
KRH33423	Soybean	extracellular	43.51	48.38
CDY72345	Canola	cytosol	38.31	48.36
TraesCS6D01G037600.1	Wheat	mitochondrion	17.86	47.41
Solyc10g018500.1.1	Tomato	extracellular	40.58	47.17
AT2G45110.1	Thale cress	extracellular	39.61	47.1
TraesCS6D01G231300.1	Wheat	extracellular	44.16	47.06
CDY18951	Canola	extracellular	41.88	46.91
CDY72505	Canola	cytosol	24.35	46.88
TraesCS3D01G482800.1	Wheat	extracellular	43.51	46.53
CDX74711	Canola	extracellular	39.29	46.36
AT1G65681.1	Thale cress	cytosol	33.44	46.19
VIT_09s0002g08510.t01	Wine grape	extracellular	41.56	45.88
TraesCS3D01G000400.1	Wheat	cytosol	30.19	45.81
KRH65410	Soybean	extracellular	39.61	45.69
CDY70406	Canola	extracellular	40.58	45.62
CDX74710	Canola	extracellular	40.58	45.62
CDX83404	Canola	extracellular	38.31	45.56
Bra000370.1-P	Field mustard	extracellular	38.31	45.56
TraesCS1D01G215400.1	Wheat	extracellular	38.96	45.45
Bra004889.1-P	Field mustard	extracellular	40.58	45.45
PGSC0003DMT400030395	Potato	cytosol, extracellular, mitochondrion, nucleus	19.16	45.38
CDY14888	Canola	extracellular	38.96	45.28
Bra035987.1-P	Field mustard	extracellular	38.96	45.28
CDX96901	Canola	extracellular	38.96	45.28
TraesCS3D01G000500.1	Wheat	extracellular	40.26	45.26
AT1G65680.1	Thale cress	extracellular	39.94	45.05
TraesCS6D01G037700.1	Wheat	extracellular	39.94	45.05
CDY18946	Canola	extracellular	38.31	44.36
TraesCS6D01G037500.1	Wheat	extracellular	39.29	44.32
TraesCS1D01G215300.1	Wheat	extracellular	39.29	44.16
Solyc01g090820.1.1	Tomato	extracellular	36.04	43.19
Solyc03g093390.2.1	Tomato	extracellular, nucleus	39.94	43.16
Solyc05g052330.1.1	Tomato	extracellular	36.69	42.16
CDX95627	Canola	extracellular	37.66	41.58
TraesCS3D01G476800.1	Wheat	extracellular	25.97	41.24
TraesCS6D01G198400.1	Wheat	extracellular	39.29	40.47
TraesCS4D01G361900.1	Wheat	extracellular	38.96	40.4
Solyc07g049540.1.1	Tomato	extracellular	33.44	40.08
TraesCS3D01G476700.1	Wheat	extracellular	39.94	40.07
Bra004891.1-P	Field mustard	cytosol, nucleus, plastid	17.86	39.86
TraesCS4D01G361700.1	Wheat	extracellular	40.58	39.56
TraesCS3D01G474800.1	Wheat	extracellular	40.26	39.49
TraesCS1D01G211500.1	Wheat	extracellular	33.77	39.25
Bra004890.1-P	Field mustard	extracellular	40.26	38.99
AT3G60570.1	Thale cress	extracellular	33.12	38.64
CDY71186	Canola	extracellular	33.77	38.38
Bra003421.1-P	Field mustard	extracellular	33.12	38.35
CDX67835	Canola	extracellular	33.12	38.35
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	38.64	37.9
TraesCS4D01G355100.1	Wheat	extracellular	33.12	37.78
TraesCS4D01G355800.1	Wheat	extracellular	33.12	37.78
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	42.21	37.46
TraesCS2D01G459300.1	Wheat	extracellular	32.14	37.36
TraesCS6D01G218500.1	Wheat	extracellular	32.47	37.31
PGSC0003DMT400095086	Potato	plastid	30.19	37.2
TraesCS1D01G215100.1	Wheat	plastid	34.09	37.1
TraesCS1D01G215500.1	Wheat	extracellular	37.66	36.83
CDX74713	Canola	extracellular	40.26	36.15
TraesCS4D01G355700.1	Wheat	extracellular	30.84	35.45
TraesCS2D01G369200.2	Wheat	extracellular	31.17	34.41
Bra014484.1-P	Field mustard	extracellular	35.71	30.56
CDY48362	Canola	extracellular	35.39	30.53
Zm00001d033231_P003	Maize	extracellular	70.78	30.53
PGSC0003DMT400066943	Potato	cytosol, plastid, vacuole	44.48	29.85
TraesCS4D01G324000.1	Wheat	extracellular	25.0	28.21
TraesCS4D01G323600.1	Wheat	extracellular	24.35	27.08
TraesCS4D01G323900.1	Wheat	golgi	23.7	26.94
TraesCS1D01G206700.1	Wheat	extracellular	23.7	25.8
TraesCS4D01G323800.2	Wheat	extracellular	23.7	24.17
TraesCS7D01G532400.1	Wheat	extracellular	20.45	20.45
TraesCS7D01G532500.1	Wheat	extracellular	20.13	19.31
TraesCS7D01G532200.1	Wheat	extracellular	19.16	19.09

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31692	PANTHER:PTHR31692:SF14	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G384200	EnsemblPlants:TraesCS5D01G384200.1	SEG:seg	:

Description

No Description!

Coordinates

chr5D:-:453817105..453818338

Molecular Weight (calculated)

32215.4 Da

IEP (calculated)

5.549

GRAVY (calculated)

0.119

Length

308 amino acids

Sequence
(BLAST)

001: MASKLQLLSS IATRVVIASL FHPCASIEIH RELSGWSDGI ATWYGDANGA GSEGGACGYQ YAVDQPPFSS MIAAGGPVIY DSGDGCGACY RVVCSGNQAC
101: SGIPVTVVIT DQGPGGGPCL SGLVDGQCQN EAAHFDMSGT AFGAMAKPGQ ADQLRGAGLI QIQYTRVTCD WTGVGLTFKV DSGSNPNYLA ILVEYEDGDS
201: DLYAVDIMQS GAGATGVWIP MQQSWGAVWK LSGSTLQGPF SIRLTFRSGK MLVAGNAIPT GWNPGVAYQP GGVAVRERAS GGRRRHVFEG GLGWLHHLLL
301: LLMVLFQL

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.