Factsheet for TraesCS3D01G000400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G011200.1	Wheat	cytosol	75.86	96.25
TraesCS3B01G014400.1	Wheat	cytosol	89.66	73.39
TraesCS3D01G000500.1	Wheat	extracellular	83.25	61.68
TraesCS6D01G037600.1	Wheat	mitochondrion	34.48	60.34
Os03t0102700-01	Rice	plastid	78.33	56.99
TraesCS3D01G476800.1	Wheat	extracellular	53.2	55.67
TraesCS4D01G361700.1	Wheat	extracellular	83.74	53.8
TraesCS6D01G198400.1	Wheat	extracellular	76.85	52.17
TraesCS1D01G215400.1	Wheat	extracellular	65.52	50.38
TraesCS1D01G215300.1	Wheat	extracellular	67.49	50.0
TraesCS3D01G476700.1	Wheat	extracellular	74.38	49.19
KXG40416	Sorghum	extracellular, vacuole	77.34	49.06
Zm00001d027283_P001	Maize	extracellular	75.86	48.43
TraesCS3D01G474800.1	Wheat	extracellular	74.88	48.41
TraesCS6D01G037500.1	Wheat	extracellular	64.53	47.99
TraesCS6D01G037700.1	Wheat	extracellular	64.53	47.99
TraesCS4D01G361900.1	Wheat	extracellular	66.01	45.12
TraesCS1D01G215100.1	Wheat	plastid	62.56	44.88
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	71.43	41.79
TraesCS1D01G215500.1	Wheat	extracellular	61.08	39.37
TraesCS1D01G211500.1	Wheat	extracellular	50.74	38.87
TraesCS2D01G459300.1	Wheat	extracellular	50.25	38.49
GSMUA_AchrUn_...	Banana	extracellular	17.24	38.04
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	58.62	37.9
TraesCS2D01G592900.1	Wheat	extracellular	46.31	37.75
TraesCS2D01G078900.1	Wheat	extracellular	46.31	37.01
TraesCS2D01G411200.1	Wheat	extracellular	46.31	36.02
TraesCS2D01G411000.1	Wheat	extracellular	46.31	35.88
TraesCS6D01G231400.1	Wheat	extracellular	46.8	35.71
TraesCS4D01G355100.1	Wheat	extracellular	47.29	35.56
TraesCS4D01G355800.1	Wheat	extracellular	47.29	35.56
TraesCS4D01G355700.1	Wheat	extracellular	46.31	35.07
TraesCS2D01G104800.1	Wheat	extracellular	41.38	33.07
TraesCS2D01G078800.1	Wheat	extracellular	41.38	33.07
TraesCS2D01G078600.1	Wheat	extracellular	37.93	32.22
TraesCS6D01G231300.1	Wheat	extracellular	45.81	32.18
TraesCS3D01G482800.1	Wheat	extracellular	44.34	31.25
TraesCS6D01G231200.1	Wheat	extracellular	43.84	31.01
TraesCS2D01G411100.1	Wheat	extracellular, plastid	42.36	30.61
TraesCS5D01G384200.1	Wheat	extracellular	45.81	30.19
TraesCS6D01G218500.1	Wheat	extracellular	37.44	28.36
TraesCS2D01G369200.2	Wheat	extracellular	36.95	26.88
TraesCS4D01G323900.1	Wheat	golgi	27.59	20.66
TraesCS4D01G323600.1	Wheat	extracellular	27.09	19.86
TraesCS1D01G206700.1	Wheat	extracellular	27.59	19.79
TraesCS4D01G324000.1	Wheat	extracellular	26.6	19.78
TraesCS4D01G323800.2	Wheat	extracellular	25.62	17.22
TraesCS7D01G532500.1	Wheat	extracellular	26.11	16.51
TraesCS7D01G532400.1	Wheat	extracellular	24.63	16.23
TraesCS7D01G532200.1	Wheat	extracellular	23.15	15.21

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
EnsemblPlantsGene:TraesCS3D01G000400	EnsemblPlants:TraesCS3D01G000400.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:356416..357339

Molecular Weight (calculated)

22637.0 Da

IEP (calculated)

5.056

GRAVY (calculated)

-0.385

Length

203 amino acids

Sequence
(BLAST)

001: MTSCGNEPLF KDGKGCGSCY QIRCLRSNHP ACSGVPETVI ITDMNYYPVS PYHFDLSGTA FGAMAKDGRN DELRNAGIID MQFRRVPCQY PGLAVMFHVE
101: KGSNPFYMAI LVEYENGDGD VKLLEIMESR PDAGNGGEMA PTGDWVPMKE SWGSIWRMDA RHRMQGSFSL RITNESGKML VGDQVIPADW KPEKVYSSVI
201: QFD

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.