Factsheet for TraesCS1D01G215300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G212300.1	Wheat	extracellular	98.91	98.91
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	95.99	88.25
Os10t0555700-02	Rice	extracellular	70.8	74.33
TraesCS6D01G037500.1	Wheat	extracellular	70.44	70.7
TraesCS6D01G037600.1	Wheat	mitochondrion	29.93	70.69
TraesCS6D01G037700.1	Wheat	extracellular	70.07	70.33
Zm00001d047093_P001	Maize	extracellular	67.15	69.7
EER91947	Sorghum	extracellular	67.52	68.77
TraesCS1D01G215400.1	Wheat	extracellular	66.06	68.56
Zm00001d029907_P001	Maize	extracellular	67.88	68.13
TraesCS3D01G000400.1	Wheat	cytosol	50.0	67.49
EER91945	Sorghum	extracellular	67.88	67.39
Zm00001d047091_P001	Maize	extracellular	66.79	67.03
TraesCS3D01G000500.1	Wheat	extracellular	64.6	64.6
TraesCS6D01G198400.1	Wheat	extracellular	66.79	61.2
TraesCS3D01G476800.1	Wheat	extracellular	41.97	59.28
TraesCS4D01G361900.1	Wheat	extracellular	62.77	57.91
Zm00001d047094_P001	Maize	extracellular	58.39	57.35
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	65.69	57.32
TraesCS3D01G474800.1	Wheat	extracellular	64.96	56.69
TraesCS3D01G476700.1	Wheat	extracellular	63.5	56.68
TraesCS1D01G215100.1	Wheat	plastid	58.39	56.54
TraesCS4D01G361700.1	Wheat	extracellular	62.77	54.43
TraesCS1D01G215500.1	Wheat	extracellular	61.68	53.65
TraesCS1D01G211500.1	Wheat	extracellular	51.82	53.58
EER91948	Sorghum	extracellular	54.01	53.24
TraesCS2D01G459300.1	Wheat	extracellular	50.37	52.08
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	63.14	49.86
TraesCS2D01G411000.1	Wheat	extracellular	47.45	49.62
TraesCS2D01G078900.1	Wheat	extracellular	45.99	49.61
TraesCS6D01G231400.1	Wheat	extracellular	47.81	49.25
TraesCS2D01G592900.1	Wheat	extracellular	44.16	48.59
TraesCS4D01G355800.1	Wheat	extracellular	47.45	48.15
TraesCS4D01G355100.1	Wheat	extracellular	47.45	48.15
TraesCS4D01G355700.1	Wheat	extracellular	46.72	47.76
TraesCS2D01G104800.1	Wheat	extracellular	43.8	47.24
TraesCS2D01G078800.1	Wheat	extracellular	42.7	46.06
TraesCS2D01G411200.1	Wheat	extracellular	43.8	45.98
TraesCS6D01G231200.1	Wheat	extracellular	47.45	45.3
TraesCS3D01G482800.1	Wheat	extracellular	47.45	45.14
TraesCS2D01G078600.1	Wheat	extracellular	39.05	44.77
TraesCS6D01G231300.1	Wheat	extracellular	46.35	43.94
GSMUA_AchrUn_...	Banana	extracellular	14.6	43.48
TraesCS2D01G411100.1	Wheat	extracellular, plastid	42.34	41.28
TraesCS5D01G384200.1	Wheat	extracellular	44.16	39.29
TraesCS6D01G218500.1	Wheat	extracellular	36.5	37.31
TraesCS2D01G369200.2	Wheat	extracellular	35.04	34.41
TraesCS4D01G323600.1	Wheat	extracellular	27.37	27.08
TraesCS4D01G323900.1	Wheat	golgi	26.28	26.57
TraesCS4D01G324000.1	Wheat	extracellular	25.91	26.01
TraesCS4D01G323800.2	Wheat	extracellular	27.01	24.5
TraesCS1D01G206700.1	Wheat	extracellular	24.45	23.67
TraesCS7D01G532500.1	Wheat	extracellular	22.99	19.63
TraesCS7D01G532200.1	Wheat	extracellular	21.53	19.09
TraesCS7D01G532400.1	Wheat	extracellular	20.8	18.51

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PFscan:PS51257
PANTHER:PTHR31692	PANTHER:PTHR31692:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1D01G215300	EnsemblPlants:TraesCS1D01G215300.1	SEG:seg

Description

No Description!

Coordinates

chr1D:-:300707712..300708979

Molecular Weight (calculated)

30191.1 Da

IEP (calculated)

9.610

GRAVY (calculated)

-0.339

Length

274 amino acids

Sequence
(BLAST)

001: MARVSANAVA LVALVSVLLT YGCCAHSALN YTGSLAKASK ASWSWLPAKA TWYGAPTGAG PDDNGGACGY KHTNQYPFMS MTSCGNEPLF KDGMGCGACY
101: QIRCVNNKAC SGKPETVMIT DMNYYPVAKY HFDLSGTAFG AMAKPGQNDK LRHAGIIDIQ FQRVPCNHPG LNVNFHVERG SNPNYLAVLV EFANREGTVV
201: QMDLMESRNG RPTGYWTAMR HSWGAIWRMD SRRRLQGPFS LRIRSESGKT LVAKQVIPAN WKPDTNYRSN VQFR

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.