Factsheet for TraesCS5D01G086000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	95.39	97.07
TraesCS5A01G073100.1	Wheat	extracellular, plasma membrane	95.39	96.78
HORVU5Hr1G019100.1	Barley	extracellular, plasma membrane	91.35	89.8
TraesCS3D01G000500.1	Wheat	extracellular	56.77	71.9
TraesCS6D01G198400.1	Wheat	extracellular	61.67	71.57
TraesCS3D01G000400.1	Wheat	cytosol	41.79	71.43
Os03t0102700-01	Rice	plastid	56.48	70.25
TraesCS3D01G476800.1	Wheat	extracellular	38.33	68.56
TraesCS3D01G476700.1	Wheat	extracellular	60.52	68.4
TraesCS3D01G474800.1	Wheat	extracellular	61.38	67.83
TraesCS1D01G215400.1	Wheat	extracellular	51.01	67.05
TraesCS4D01G361700.1	Wheat	extracellular	59.37	65.19
KXG40416	Sorghum	extracellular, vacuole	58.79	63.75
Zm00001d027283_P001	Maize	extracellular	58.21	63.52
TraesCS1D01G215300.1	Wheat	extracellular	49.86	63.14
TraesCS6D01G037600.1	Wheat	mitochondrion	20.75	62.07
TraesCS6D01G037700.1	Wheat	extracellular	48.13	61.17
TraesCS6D01G037500.1	Wheat	extracellular	47.84	60.81
TraesCS4D01G361900.1	Wheat	extracellular	47.84	55.89
TraesCS1D01G215100.1	Wheat	plastid	43.52	53.36
TraesCS1D01G215500.1	Wheat	extracellular	46.69	51.43
TraesCS1D01G211500.1	Wheat	extracellular	39.19	51.32
TraesCS2D01G459300.1	Wheat	extracellular	39.19	51.32
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	44.96	49.68
TraesCS2D01G411000.1	Wheat	extracellular	37.18	49.24
TraesCS2D01G078900.1	Wheat	extracellular	36.02	49.21
TraesCS2D01G592900.1	Wheat	extracellular	35.16	49.0
TraesCS6D01G231400.1	Wheat	extracellular	36.6	47.74
TraesCS2D01G104800.1	Wheat	extracellular	34.58	47.24
TraesCS2D01G078800.1	Wheat	extracellular	34.01	46.46
TraesCS4D01G355100.1	Wheat	extracellular	36.02	46.3
TraesCS4D01G355800.1	Wheat	extracellular	36.02	46.3
TraesCS2D01G078600.1	Wheat	extracellular	31.7	46.03
TraesCS2D01G411200.1	Wheat	extracellular	34.58	45.98
GSMUA_AchrUn_...	Banana	extracellular	12.1	45.65
TraesCS6D01G231200.1	Wheat	extracellular	37.46	45.3
TraesCS4D01G355700.1	Wheat	extracellular	34.58	44.78
TraesCS6D01G231300.1	Wheat	extracellular	36.6	43.94
TraesCS3D01G482800.1	Wheat	extracellular	36.02	43.4
TraesCS5D01G384200.1	Wheat	extracellular	37.46	42.21
TraesCS2D01G411100.1	Wheat	extracellular, plastid	32.85	40.57
TraesCS6D01G218500.1	Wheat	extracellular	28.82	37.31
TraesCS2D01G369200.2	Wheat	extracellular	27.67	34.41
TraesCS4D01G323600.1	Wheat	extracellular	21.04	26.35
TraesCS4D01G323900.1	Wheat	golgi	20.46	26.2
TraesCS1D01G206700.1	Wheat	extracellular	20.17	24.73
TraesCS4D01G324000.1	Wheat	extracellular	19.31	24.54
TraesCS4D01G323800.2	Wheat	extracellular	19.31	22.19
TraesCS7D01G532400.1	Wheat	extracellular	18.44	20.78
TraesCS7D01G532500.1	Wheat	extracellular	19.02	20.56
TraesCS7D01G532200.1	Wheat	extracellular	18.16	20.39

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G086000	EnsemblPlants:TraesCS5D01G086000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:91405374..91407008

Molecular Weight (calculated)

38016.2 Da

IEP (calculated)

7.822

GRAVY (calculated)

-0.135

Length

347 amino acids

Sequence
(BLAST)

001: MAASFSFARA RVVALFFLVA AHPHGCCGCG YLPDLFCYPP PPPAPTTNVP TTNVPATNVP ASNIPASNSS SDEGWLDARA TWYGAPNGAG PYDNGGACGF
101: KNVNWPPFSS MTSCGNQPIF KDGKGCGSCY QIRCVAHRAC SGIPETVIIT DMNYYPVSRY HFDLSGTAFG AMAKYGRHDE LRHAGIIDMQ FKRVPCQYPG
201: LTVTFRVQHG SNPNYLAILV EYEDGAGDVS QVDIMESRLP DRAPTGYWTP MRESWGSIWR LDRLRPLQGP FSLRVTDESG RSLVADQVIP AYWQPNAAYR
301: SLVQFDETLP MSLVTSGAAS RRRLVLPMMY SAALTYVWPC VRSILAV

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.