Factsheet for TraesCS6D01G037600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G271700.1	Wheat	cytosol	86.21	96.15
TraesCSU01G236100.1	Wheat	cytosol	86.21	96.15
TraesCSU01G216000.1	Wheat	cytosol	95.69	72.55
GSMUA_AchrUn_...	Banana	extracellular	37.07	46.74
TraesCS6D01G037700.1	Wheat	extracellular	100.0	42.49
TraesCS6D01G037500.1	Wheat	extracellular	98.28	41.76
TraesCS3D01G000400.1	Wheat	cytosol	60.34	34.48
TraesCS1D01G215200.1	Wheat	extracellular, mitochondrion, nucleus, plastid	87.07	32.17
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	37.93	31.88
TraesCS1D01G215300.1	Wheat	extracellular	70.69	29.93
TraesCS1D01G215400.1	Wheat	extracellular	61.21	26.89
TraesCS1D01G215100.1	Wheat	plastid	64.66	26.5
TraesCS6D01G198400.1	Wheat	extracellular	67.24	26.09
TraesCS3D01G000500.1	Wheat	extracellular	60.34	25.55
TraesCS4D01G361700.1	Wheat	extracellular	66.38	24.37
TraesCS3D01G476800.1	Wheat	extracellular	40.52	24.23
TraesCS3D01G476700.1	Wheat	extracellular	62.07	23.45
TraesCS1D01G211500.1	Wheat	extracellular	53.45	23.4
TraesCS3D01G474800.1	Wheat	extracellular	62.93	23.25
TraesCS4D01G361900.1	Wheat	extracellular	57.76	22.56
TraesCS2D01G592900.1	Wheat	extracellular	48.28	22.49
TraesCS2D01G078900.1	Wheat	extracellular	49.14	22.44
TraesCS2D01G411000.1	Wheat	extracellular	50.0	22.14
TraesCS2D01G459300.1	Wheat	extracellular	50.0	21.89
TraesCS6D01G231400.1	Wheat	extracellular	50.0	21.8
TraesCS2D01G078600.1	Wheat	extracellular	44.83	21.76
TraesCS2D01G411200.1	Wheat	extracellular	47.41	21.07
TraesCS5D01G086000.1	Wheat	extracellular, plasma membrane	62.07	20.75
TraesCS1D01G215500.1	Wheat	extracellular	55.17	20.32
TraesCS2D01G104800.1	Wheat	extracellular	43.97	20.08
TraesCS2D01G078800.1	Wheat	extracellular	41.38	18.9
TraesCS6D01G231200.1	Wheat	extracellular	44.83	18.12
TraesCS5D01G384200.1	Wheat	extracellular	47.41	17.86
TraesCS4D01G355100.1	Wheat	extracellular	39.66	17.04
TraesCS4D01G355800.1	Wheat	extracellular	39.66	17.04
TraesCS6D01G231300.1	Wheat	extracellular	42.24	16.95
TraesCS2D01G411100.1	Wheat	extracellular, plastid	40.52	16.73
TraesCS3D01G482800.1	Wheat	extracellular	41.38	16.67
TraesCS4D01G355700.1	Wheat	extracellular	37.93	16.42
TraesCS6D01G218500.1	Wheat	extracellular	37.07	16.04
TraesCS2D01G369200.2	Wheat	extracellular	35.34	14.7
TraesCS4D01G323900.1	Wheat	golgi	29.31	12.55
TraesCS4D01G324000.1	Wheat	extracellular	28.45	12.09
TraesCS4D01G323600.1	Wheat	extracellular	28.45	11.91
TraesCS1D01G206700.1	Wheat	extracellular	25.0	10.25
TraesCS4D01G323800.2	Wheat	extracellular	25.0	9.6
TraesCS7D01G532200.1	Wheat	extracellular	24.14	9.06
TraesCS7D01G532400.1	Wheat	extracellular	22.41	8.44
TraesCS7D01G532500.1	Wheat	extracellular	23.28	8.41

Protein Annotations

Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007117	InterPro:IPR036749	InterPro:LolPI
PFAM:PF01357	PRINTS:PR00829	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF19	SUPFAM:SSF49590
EnsemblPlantsGene:TraesCS6D01G037600	EnsemblPlants:TraesCS6D01G037600.1	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:15585851..15586201

Molecular Weight (calculated)

13552.3 Da

IEP (calculated)

11.090

GRAVY (calculated)

-0.560

Length

116 amino acids

Sequence
(BLAST)

001: MQFRRVRCNF PGMKVTFHVQ RGSNPNYLAV LVEYANVDGT VVRMELMQTR NGRPTGSWEP MRRSWGSIWR MDTSRPLQGP FSMRITSDSG KTLVANNVIP
101: AYWRPDKAYW SNVQFY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.