CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05780	Sorghum	extracellular	93.88	93.56
Zm00001d017495_P001	Maize	extracellular	91.16	91.16
Os02t0658800-01	Rice	extracellular	84.35	84.93
EER98447	Sorghum	extracellular	70.75	67.75
EER98449	Sorghum	extracellular	70.75	66.67
EES11234	Sorghum	extracellular	54.76	61.22
EES07509	Sorghum	extracellular	54.76	60.98
EES11235	Sorghum	extracellular	59.86	60.48
EES11233	Sorghum	extracellular	59.18	60.42
KXG19818	Sorghum	extracellular	50.0	56.76
EER88254	Sorghum	extracellular	50.0	56.76
EER91942	Sorghum	extracellular	46.6	51.5
EER93754	Sorghum	extracellular	49.32	47.39
EER91947	Sorghum	extracellular	42.18	46.1
OQU92157	Sorghum	extracellular	47.96	45.78
EER94537	Sorghum	extracellular	40.48	44.74
KXG38972	Sorghum	extracellular	40.48	44.74
KXG38969	Sorghum	extracellular	40.48	44.74
EER91945	Sorghum	extracellular	41.84	44.57
KXG37946	Sorghum	extracellular	48.64	44.0
EER94500	Sorghum	extracellular	43.2	43.79
OQU93456	Sorghum	cytosol, extracellular	31.29	43.4
OQU92156	Sorghum	plastid	47.96	43.38
KXG40417	Sorghum	mitochondrion	43.54	43.1
OQU93455	Sorghum	extracellular	37.41	42.97
KXG38933	Sorghum	mitochondrion	46.6	42.95
EER94506	Sorghum	extracellular	41.16	42.91
EER91949	Sorghum	extracellular	41.16	42.91
OQU93459	Sorghum	extracellular	38.44	42.48
EER95684	Sorghum	extracellular	38.1	42.11
EER95683	Sorghum	extracellular	38.1	42.11
OQU93457	Sorghum	extracellular	38.1	42.11
OQU93458	Sorghum	extracellular	38.1	42.11
EES05488	Sorghum	extracellular	38.78	41.76
EER91948	Sorghum	extracellular	39.12	41.37
KXG40416	Sorghum	extracellular, vacuole	44.9	41.25
EES05315	Sorghum	extracellular	44.56	41.2
EER95568	Sorghum	extracellular	27.55	30.0
EER99370	Sorghum	extracellular	27.21	29.2
KXG38992	Sorghum	extracellular	26.19	27.3
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	16.33	21.33
KXG20919	Sorghum	plastid	21.43	14.22

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:8076229	UniProt:C5XRX2	EnsemblPlants:EES07508
ProteinID:EES07508	ProteinID:EES07508.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357	PFAM:PF03330
PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF50
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	EnsemblPlantsGene:SORBI_3004G294400	SUPFAM:SSF49590	SUPFAM:SSF50685
unigene:Sbi.18262	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A8603D	RefSeq:XP_002454532.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:63449764..63451513

Molecular Weight (calculated)

30767.7 Da

IEP (calculated)

8.595

GRAVY (calculated)

-0.067

Length

294 amino acids

Sequence
(BLAST)

001: MAKSCTFLFV ALVVLLLLVS PIACSRKLAK PNKHRPRHKP AVRARSSSNH TATPSMSDAY GSGGWLSAGA TYYGAPDGDG SDGGACGYQT AVGQRPFSSM
101: IAAGSPSLFK GGKGCGACYE VKCDGNAACS GQPATVVITD ECPGGVCLAE AAHFDMSGTS MGAMAKPGMA DKLRAAGILK VQYKRVPCKY SGVNIAFRVD
201: QGSNPFYFEV LVEFEDGDGD LSAVDLMEAG CGTWTPMVQN WGALWRYNSN TGKALKAPFS LRLTSDSGKV LVANNVIPAG WNPGATYRSL VNYS

Best Arabidopsis Sequence Match ( AT2G45110.1 )
(BLAST)

001: MASSQRYFAL LALFAVSLKF CYCQNETIDV AGSGTAGVTW YGEPFGAGST GGACGYGSAV ANPPLYAMVS AGGPSLFNNG KGCGTCYQVV CIGHPACSGS
101: PITVTITDEC PGGPCASEPV HIDLSGKAMG ALAKPGQADQ LRSAGVIRVN YKRAACLYRG TNIVFRMDAG ANPYYISFVV EYENGDGDLS NVEIQPAGGS
201: FISMQEMRSA VWKVNSGSAL RGPFNIRLTS GESHKVIVAY NVIPANWKPD ESYRSIVNF

Arabidopsis Description

EXPB4Expansin-B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHD1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.