Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004586_P001 | Maize | extracellular | 93.71 | 95.21 |
| EER91942 | Sorghum | extracellular | 69.18 | 82.71 |
| TraesCS1A01G212400.1 | Wheat | extracellular | 62.58 | 75.09 |
| TraesCS1D01G215400.1 | Wheat | extracellular | 62.26 | 75.0 |
| Os10t0555900-02 | Rice | extracellular | 62.89 | 74.63 |
| TraesCS1B01G226000.2 | Wheat | extracellular | 62.26 | 73.33 |
| OQU92157 | Sorghum | extracellular | 70.13 | 72.4 |
| KXG38933 | Sorghum | mitochondrion | 70.13 | 69.91 |
| OQU92156 | Sorghum | plastid | 67.92 | 66.46 |
| EER91949 | Sorghum | extracellular | 55.66 | 62.77 |
| EER94506 | Sorghum | extracellular | 55.66 | 62.77 |
| HORVU1Hr1G054240.2 | Barley | plastid | 61.64 | 61.83 |
| EER91947 | Sorghum | extracellular | 51.89 | 61.34 |
| EER91945 | Sorghum | extracellular | 52.83 | 60.87 |
| KXG40416 | Sorghum | extracellular, vacuole | 60.38 | 60.0 |
| EER94500 | Sorghum | extracellular | 54.4 | 59.66 |
| KXG40417 | Sorghum | mitochondrion | 53.14 | 56.9 |
| OQU93456 | Sorghum | cytosol, extracellular | 36.79 | 55.19 |
| KXG38969 | Sorghum | extracellular | 45.6 | 54.51 |
| EER94537 | Sorghum | extracellular | 44.97 | 53.76 |
| KXG38972 | Sorghum | extracellular | 44.97 | 53.76 |
| OQU93455 | Sorghum | extracellular | 41.2 | 51.17 |
| OQU93459 | Sorghum | extracellular | 41.82 | 50.0 |
| OQU93458 | Sorghum | extracellular | 41.51 | 49.62 |
| EER95684 | Sorghum | extracellular | 41.51 | 49.62 |
| OQU93457 | Sorghum | extracellular | 41.51 | 49.62 |
| EER95683 | Sorghum | extracellular | 41.51 | 49.62 |
| EER91948 | Sorghum | extracellular | 42.45 | 48.56 |
| EES07509 | Sorghum | extracellular | 38.36 | 46.21 |
| GSMUA_AchrUn_... | Banana | extracellular | 13.21 | 45.65 |
| KXG19818 | Sorghum | extracellular | 36.48 | 44.79 |
| EES05780 | Sorghum | extracellular | 41.51 | 44.75 |
| EES07508 | Sorghum | extracellular | 41.2 | 44.56 |
| EES11234 | Sorghum | extracellular | 36.79 | 44.49 |
| EER88254 | Sorghum | extracellular | 36.16 | 44.4 |
| EES11235 | Sorghum | extracellular | 39.62 | 43.3 |
| EES11233 | Sorghum | extracellular | 38.05 | 42.01 |
| EER93754 | Sorghum | extracellular | 38.99 | 40.52 |
| EER98449 | Sorghum | extracellular | 38.68 | 39.42 |
| EER98447 | Sorghum | extracellular | 37.74 | 39.09 |
| KXG37946 | Sorghum | extracellular | 39.94 | 39.08 |
| EES05488 | Sorghum | extracellular | 33.02 | 38.46 |
| EER95568 | Sorghum | extracellular | 22.64 | 26.67 |
| EER99370 | Sorghum | extracellular | 20.75 | 24.09 |
| KXG38992 | Sorghum | extracellular | 20.13 | 22.7 |
| OQU89980 | Sorghum | extracellular, plasma membrane, vacuole | 13.84 | 19.56 |
| KXG20919 | Sorghum | plastid | 19.5 | 14.0 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:8070553 | UniProt:C5XVR2 | EnsemblPlants:EES05315 |
| ProteinID:EES05315 | ProteinID:EES05315.1 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | InterPro:LolPI |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31692 | PANTHER:PTHR31692:SF17 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | EnsemblPlantsGene:SORBI_3004G191600 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | unigene:Sbi.17099 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0001A858D8 |
| RefSeq:XP_002452339.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:54338676..54341686
Molecular Weight (calculated)
34626.3 Da
IEP (calculated)
6.966
GRAVY (calculated)
0.034
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAQCKLVAL GALIFFLLVS YGSCTRIVNF NASHITADPY WVAARATWYG APTGAGPYDN GGACGFKNVN LPPFSAMTSC GNQPLFKDGK GCGSCYQIRC
101: VNHPACSGNP ETVMITDMNY YPVAKYHFDL SGTAFGAMAQ PGRNNELRHA GIIDIQFRRV PCIYPGQTVT FHIEHGSNPN YLAVLVEFED GDGDVVQVDI
201: MEANSGWWTP MRESWGSIWR MDSKRRLQGP FSLRITNESG ERLVAYQVIP ANWAPNTYYR SNIQYEAFGS AAGQAIGFGS AVGLVISSAA GLHTVITGII
301: GLICLVLYHL HGIEVPQF
101: VNHPACSGNP ETVMITDMNY YPVAKYHFDL SGTAFGAMAQ PGRNNELRHA GIIDIQFRRV PCIYPGQTVT FHIEHGSNPN YLAVLVEFED GDGDVVQVDI
201: MEANSGWWTP MRESWGSIWR MDSKRRLQGP FSLRITNESG ERLVAYQVIP ANWAPNTYYR SNIQYEAFGS AAGQAIGFGS AVGLVISSAA GLHTVITGII
301: GLICLVLYHL HGIEVPQF
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.