Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G215400.1 | Wheat | extracellular | 81.72 | 82.95 |
| TraesCS1A01G212400.1 | Wheat | extracellular | 81.34 | 82.26 |
| Zm00001d029903_P002 | Maize | extracellular | 81.72 | 82.02 |
| EER91942 | Sorghum | extracellular | 81.34 | 81.95 |
| Zm00001d047090_P002 | Maize | extracellular | 82.46 | 81.85 |
| Zm00001d029906_P001 | Maize | extracellular | 81.34 | 81.34 |
| Zm00001d047089_P001 | Maize | extracellular | 80.97 | 81.27 |
| TraesCS1B01G226000.2 | Wheat | extracellular | 81.34 | 80.74 |
| Os10t0555600-01 | Rice | extracellular | 76.87 | 74.91 |
| OQU92157 | Sorghum | extracellular | 81.34 | 70.78 |
| KXG38933 | Sorghum | mitochondrion | 81.34 | 68.34 |
| HORVU1Hr1G054240.2 | Barley | plastid | 80.6 | 68.14 |
| OQU92156 | Sorghum | plastid | 81.72 | 67.38 |
| Os10t0555700-02 | Rice | extracellular | 64.93 | 66.67 |
| Os10t0556100-01 | Rice | extracellular | 70.15 | 65.73 |
| Os03t0102700-01 | Rice | plastid | 67.91 | 65.23 |
| EES05315 | Sorghum | extracellular | 74.63 | 62.89 |
| Zm00001d004586_P001 | Maize | extracellular | 72.76 | 62.3 |
| Os03t0102500-01 | Rice | extracellular | 63.43 | 61.59 |
| Os10t0548600-01 | Rice | plasma membrane | 55.6 | 55.39 |
| Os03t0106800-01 | Rice | plasma membrane | 53.73 | 53.93 |
| Os05t0246300-01 | Rice | extracellular | 50.0 | 50.76 |
| Os03t0106500-01 | Rice | plasma membrane | 50.0 | 50.19 |
| Os03t0106900-00 | Rice | extracellular | 50.0 | 50.19 |
| Os04t0552000-00 | Rice | extracellular | 49.25 | 50.0 |
| Os03t0106700-00 | Rice | extracellular | 39.55 | 46.49 |
| Os02t0658800-01 | Rice | extracellular | 50.0 | 45.89 |
| Os04t0552200-00 | Rice | plasma membrane | 47.01 | 45.82 |
| GSMUA_AchrUn_... | Banana | extracellular | 15.67 | 45.65 |
| Os02t0658600-00 | Rice | plastid | 46.27 | 45.42 |
| Os03t0645000-00 | Rice | mitochondrion | 44.03 | 37.7 |
| Os02t0639500-01 | Rice | extracellular | 35.07 | 36.02 |
| Os07t0496250-01 | Rice | extracellular | 25.37 | 26.56 |
| Os03t0132200-01 | Rice | extracellular, plastid | 25.75 | 24.73 |
| Os10t0542400-01 | Rice | extracellular | 25.37 | 24.73 |
| Os07t0475400-01 | Rice | extracellular | 23.51 | 22.83 |
| Os06t0725300-01 | Rice | endoplasmic reticulum | 23.88 | 20.45 |
| Os04t0530100-01 | Rice | extracellular, mitochondrion, vacuole | 23.13 | 19.2 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | EntrezGene:4349349 | ProteinID:AAK15453.1 | ProteinID:AAK55465.1 |
| ProteinID:ABB47975.2 | EMBL:AF261271 | EMBL:AK100959 | UniProt:B7ER55 | ProteinID:BAF27188.1 | ProteinID:BAT11995.1 |
| EMBL:EU267995 | InterPro:Expan_Lol_pI | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0019953 | GO:GO:0030312 | GO:GO:0071555 | InterPro:IPR007112 |
| InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | EMBL:KJ909985 | InterPro:LolPI | EnsemblPlantsGene:Os10g0555900 |
| EnsemblPlants:Os10t0555900-02 | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF17 | UniProt:Q336T5 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf |
| SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM | UniParc:UPI000009E096 | RefSeq:XP_015612911.1 |
| SEG:seg | : | : | : | : | : |
Description
BETA-EXPANSIN 3Similar to Beta-expansin. (Os10t0555900-01);Beta-expansin precursor. (Os10t0555900-02)
Coordinates
chr10:-:21847828..21849722
Molecular Weight (calculated)
29193.2 Da
IEP (calculated)
5.616
GRAVY (calculated)
-0.200
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSISKKAA VAALFSFLVV TCVAGARPGN FSASDFTADP NWEVARATWY GAPTGAGPDD DGGACGFKNT NQYPFSSMTS CGNEPIFKDG KGCGSCYQIR
101: CVNHPACSGN PETVIITDMN YYPVSKYHFD LSGTAFGAMA KPGQNDQLRH AGIIDIQFKR VPCNFPGLKV TFHVEEGSNP VYFAVLVEYE DGDGDVVQVD
201: LMEANSQSWT PMRESWGSIW RLDSNHRLTA PFSLRITNES GKQLVASQVI PANWAPMAVY RSFVQYSS
101: CVNHPACSGN PETVIITDMN YYPVSKYHFD LSGTAFGAMA KPGQNDQLRH AGIIDIQFKR VPCNFPGLKV TFHVEEGSNP VYFAVLVEYE DGDGDVVQVD
201: LMEANSQSWT PMRESWGSIW RLDSNHRLTA PFSLRITNES GKQLVASQVI PANWAPMAVY RSFVQYSS
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.