Factsheet for Os10t0548600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G208200.1	Wheat	extracellular	73.23	74.34
TraesCS1B01G222300.1	Wheat	extracellular	72.86	73.96
TraesCS1D01G211500.1	Wheat	extracellular	72.86	73.96
Zm00001d047135_P011	Maize	extracellular	73.61	73.61
Zm00001d047147_P001	Maize	extracellular	72.86	72.86
Zm00001d047146_P001	Maize	extracellular	72.86	72.86
Zm00001d047142_P001	Maize	extracellular	72.49	72.49
EER94537	Sorghum	extracellular	67.66	68.42
KXG38969	Sorghum	extracellular	67.66	68.42
KXG38972	Sorghum	extracellular	67.66	68.42
HORVU1Hr1G053300.1	Barley	extracellular	69.89	67.87
Os03t0106800-01	Rice	plasma membrane	65.43	65.92
Os03t0106900-00	Rice	extracellular	63.2	63.67
Os03t0106500-01	Rice	plasma membrane	63.2	63.67
Os03t0106700-00	Rice	extracellular	50.93	60.09
Zm00001d029827_P001	Maize	extracellular	47.96	56.09
Os10t0555900-02	Rice	extracellular	55.39	55.6
Os10t0555600-01	Rice	extracellular	54.65	53.45
Os10t0555700-02	Rice	extracellular	51.3	52.87
Os03t0102700-01	Rice	plastid	54.28	52.33
Os03t0102500-01	Rice	extracellular	53.53	52.17
Os10t0556100-01	Rice	extracellular	50.56	47.55
Os04t0552000-00	Rice	extracellular	43.49	44.32
Os05t0246300-01	Rice	extracellular	43.49	44.32
Os02t0658800-01	Rice	extracellular	46.47	42.81
Os02t0658600-00	Rice	plastid	43.12	42.49
GSMUA_AchrUn_...	Banana	extracellular	14.5	42.39
Os04t0552200-00	Rice	plasma membrane	42.38	41.45
Os02t0639500-01	Rice	extracellular	36.8	37.93
Os03t0645000-00	Rice	mitochondrion	39.41	33.87
Os07t0496250-01	Rice	extracellular	26.77	28.12
Os03t0132200-01	Rice	extracellular, plastid	23.42	22.58
Os07t0475400-01	Rice	extracellular	23.05	22.46
Os10t0542400-01	Rice	extracellular	22.3	21.82
Os04t0530100-01	Rice	extracellular, mitochondrion, vacuole	24.16	20.12
Os06t0725300-01	Rice	endoplasmic reticulum	21.56	18.53

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	EntrezGene:4349301	ProteinID:AAK43515.1	ProteinID:AAP54906.1
EMBL:AF220610	EMBL:AF261277	EMBL:AK099112	ProteinID:BAF27142.1	ProteinID:BAT11929.1	ProteinID:EAZ16888.1
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0019953	GO:GO:0030312	GO:GO:0071555	UniProt:I3QD43	InterPro:IPR007112
InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EMBL:JF969198	InterPro:LolPI	EnsemblPlantsGene:Os10g0548600
EnsemblPlants:Os10t0548600-01	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF7	UniProt:Q7XCG7	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI00000A4C16	RefSeq:XP_015614058.1
SEG:seg	:	:	:	:	:

Description

BETA-EXPANSIN 9Beta-expansin precursor. (Os10t0548600-01)

Coordinates

chr10:+:21465009..21466788

Molecular Weight (calculated)

28987.0 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.080

Length

269 amino acids

Sequence
(BLAST)

001: MGSLTTNIVL AVAVVAALVG GGSCGPPKVP PGPNITTNYN APWLPARATW YGQPYGSGST DNGGACGIKN VNLPPYNGMI SCGNVPIFKD GRGCGSCYEV
101: KCEQPAACSK QPVTVFITDM NYEPISAYHF DFSGKAFGAM ACPGKETELR KAGIIDMQFR RVRCKYPGGQ KVTFHVEKGS NPNYLAVLVK FVADDGDVIQ
201: MDLQEAGLPA WRPMKLSWGA IWRMDTATPL KAPFSIRVTT ESGKSLIAKD VIPVNWMPDA IYVSNVQFY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.