Factsheet for TraesCS4B01G375600.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G537300.1	Wheat	cytosol, extracellular, plastid	47.21	100.0
TraesCS4D01G361700.1	Wheat	extracellular	91.5	98.73
TraesCS3B01G014300.1	Wheat	extracellular, nucleus	66.57	82.85
TraesCS3B01G014400.1	Wheat	cytosol	58.36	80.24
HORVU4Hr1G088080.4	Barley	plastid	92.67	78.41
TraesCS6B01G245700.1	Wheat	extracellular	65.98	76.01
Os03t0102700-01	Rice	plastid	61.29	74.91
TraesCS3B01G526800.1	Wheat	extracellular	63.34	72.0
KXG40416	Sorghum	extracellular, vacuole	66.57	70.94
TraesCS3B01G524500.1	Wheat	extracellular	63.34	69.45
Zm00001d027283_P001	Maize	extracellular	62.76	67.3
TraesCS6B01G046000.1	Wheat	extracellular	51.91	64.84
TraesCS6B01G046300.1	Wheat	extracellular	51.61	64.47
TraesCS6B01G046200.1	Wheat	extracellular	51.61	64.47
TraesCS1B01G226000.2	Wheat	extracellular	51.03	64.44
TraesCS6B01G046400.1	Wheat	extracellular	51.03	63.74
TraesCS6B01G046100.1	Wheat	extracellular	51.03	63.74
TraesCS5B01G079400.1	Wheat	extracellular, plasma membrane	61.0	61.0
TraesCS1B01G225800.1	Wheat	extracellular	47.51	59.78
TraesCS4B01G375200.1	Wheat	extracellular	50.44	58.9
TraesCS1B01G225900.1	Wheat	extracellular, mitochondrion, plastid	49.85	57.05
TraesCS1B01G225700.1	Wheat	extracellular	48.97	55.3
TraesCS1B01G222300.1	Wheat	extracellular	41.06	52.83
TraesCS1B01G226100.1	Wheat	extracellular	48.09	52.56
TraesCS2B01G480700.1	Wheat	extracellular	38.42	49.43
TraesCS2B01G095600.1	Wheat	extracellular	36.66	49.02
TraesCS2B01G607400.1	Wheat	extracellular	35.78	49.0
TraesCS2B01G432300.1	Wheat	plastid	36.95	48.09
TraesCS2B01G095700.1	Wheat	extracellular	35.19	47.62
TraesCS4B01G362100.1	Wheat	extracellular	37.54	47.41
TraesCS4B01G362600.1	Wheat	extracellular, unclear	37.24	47.04
TraesCS4B01G362500.1	Wheat	extracellular	37.24	47.04
TraesCS2B01G432100.1	Wheat	extracellular	35.19	45.98
GSMUA_AchrUn_...	Banana	extracellular	12.32	45.65
TraesCS2B01G122100.1	Wheat	extracellular	24.34	43.46
TraesCS6B01G275800.1	Wheat	extracellular	35.48	42.16
TraesCS2B01G432200.1	Wheat	extracellular, plastid	34.31	41.64
TraesCS5B01G376500.1	Wheat	extracellular	36.66	40.45
TraesCS3B01G535800.1	Wheat	extracellular	33.43	39.45
TraesCS6B01G275700.1	Wheat	extracellular	33.43	39.45
TraesCS6B01G264400.1	Wheat	extracellular	29.03	36.94
TraesCS2B01G390000.1	Wheat	extracellular	30.21	36.65
TraesCS4B01G327100.1	Wheat	golgi	20.82	26.2
TraesCS4B01G327200.1	Wheat	extracellular	20.53	26.12
TraesCS4B01G326900.1	Wheat	extracellular	20.82	25.82
TraesCS1B01G217200.1	Wheat	extracellular	19.65	24.36
TraesCS7B01G468700.1	Wheat	endoplasmic reticulum, extracellular	17.89	19.3
TraesCS7B01G469200.1	Wheat	endoplasmic reticulum, extracellular	17.6	18.81
TraesCS7B01G469100.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	17.01	9.01

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF23	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4B01G375600	EnsemblPlants:TraesCS4B01G375600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:+:659520013..659521732

Molecular Weight (calculated)

35606.6 Da

IEP (calculated)

6.218

GRAVY (calculated)

-0.315

Length

341 amino acids

Sequence
(BLAST)

001: MASSSSSSSV AVAAALLLCI LAAHGHGCCA KRSGGGGGKK PHSHHAPPHA HGAPPPSSPP AAGAPSYGYG SPPPPAAIPP PPAAPPAANS SSNSTNVDAG
101: GWLDARATWY GAPKGAGPDD NGGACGFKNV NLPPFSAMTS CGNEPLFKDG KGCGSCYQIR CVSAGHPACS GVPETVIITD MNYYPVSRFH FDLSGTAFGA
201: MAKDGRNDEL RHAGIIDMQF RRVPCQYPGL TVTFHVQHGS NPYYLAILVE YENGDGDVDQ VDIMQSRPDA AAGEGGMAPT GEWVPMTESW GSIWRMDTRR
301: PMQGPFSLRI TNESGKTLVA DQVIPADWEP NEIYSSIIQF D

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.