Factsheet for TraesCSU01G085500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G216000.1	Wheat	cytosol	73.47	94.12
TraesCSU01G236100.1	Wheat	cytosol	48.98	92.31
TraesCSU01G271700.1	Wheat	cytosol	48.98	92.31
HORVU3Hr1G076110.1	Barley	cytosol, extracellular	58.16	82.61
TraesCS6A01G032700.1	Wheat	extracellular	97.45	69.96
TraesCS6D01G037700.1	Wheat	extracellular	96.94	69.6
TraesCS6B01G046400.1	Wheat	extracellular	96.43	69.23
GSMUA_AchrUn_...	Banana	extracellular	21.94	46.74
TraesCSU01G009600.1	Wheat	extracellular	46.43	35.97
TraesCSU01G099200.1	Wheat	endoplasmic reticulum, extracellular	22.45	14.29
TraesCSU01G099100.1	Wheat	extracellular, golgi	22.45	14.1

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0019953
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	InterPro:LolPI	PFAM:PF01357
PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31692
PANTHER:PTHR31692:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
EnsemblPlantsGene:TraesCSU01G085500	EnsemblPlants:TraesCSU01G085500.1	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:76409018..76409835

Molecular Weight (calculated)

21920.2 Da

IEP (calculated)

8.728

GRAVY (calculated)

-0.335

Length

196 amino acids

Sequence
(BLAST)

001: MTSCGNEPLF DGGAGCGSCY EIRCVAANNP SCSGQPRTVV ITDMNYYPVA RYHFDLSGTA FGAMAKNGLN DKLRHAGIID MQFRRVRCNF PGMKVTFHVQ
101: RGSNPNYLAV LVEYANVDGT VVRMELMQTK NGRPTGSWEP MRCSWGSIWR MDTNRPLQGP FSMCITSDSG KTLVANNVIP AYWRPDKAYW SNVQFY

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.