CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04284	Soybean	extracellular	96.0	95.62
KRH77254	Soybean	extracellular	82.4	80.78
KRH28238	Soybean	extracellular	80.4	78.82
KRH76358	Soybean	extracellular, plasma membrane, vacuole	67.2	77.06
VIT_02s0012g00830.t01	Wine grape	extracellular	70.8	69.41
Solyc08g077330.2.1	Tomato	extracellular	70.0	68.63
PGSC0003DMT400004660	Potato	extracellular	69.6	68.24
PGSC0003DMT400052810	Potato	extracellular	67.2	66.4
GSMUA_AchrUn_...	Banana	extracellular	65.6	64.57
Os07t0496250-01	Rice	extracellular	64.0	62.5
GSMUA_Achr11P...	Banana	extracellular	58.0	57.09
OQU89980	Sorghum	extracellular, plasma membrane, vacuole	39.6	44.0
GSMUA_Achr5P12710_001	Banana	extracellular, nucleus, plasma membrane	56.0	43.89
KRH57515	Soybean	extracellular	44.0	43.82
KRH04222	Soybean	extracellular	43.6	43.43
KRH04215	Soybean	nucleus	42.4	42.4
KRH04218	Soybean	extracellular	42.4	42.4
KRH57512	Soybean	extracellular	41.6	42.11
KRH77296	Soybean	extracellular	41.6	41.43
KRH57508	Soybean	endoplasmic reticulum	40.4	41.39
KRH28194	Soybean	extracellular	41.2	41.04
KRH04221	Soybean	extracellular	40.4	40.89
KRH04220	Soybean	endoplasmic reticulum	40.4	40.73
KRH29091	Soybean	extracellular	36.8	35.52
KRH33426	Soybean	extracellular	37.2	34.19
KRH24119	Soybean	extracellular	35.6	34.1
KRH33423	Soybean	extracellular	35.2	31.77
KRG88934	Soybean	extracellular, vacuole	34.8	31.41
KRH75302	Soybean	extracellular	34.0	30.69
KRH22402	Soybean	extracellular	30.8	29.84
KRH65410	Soybean	extracellular	31.2	29.21
KRH26935	Soybean	extracellular	29.6	28.35
KRH55988	Soybean	extracellular	29.6	27.72
KRH25552	Soybean	extracellular	28.8	26.97

Protein Annotations

EntrezGene:100812555	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.4	EMBL:ACUP02002857	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_05G069100	GO:GO:0005575	GO:GO:0005576
UniProt:I1K0Z7	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EnsemblPlants:KRH57566
ProteinID:KRH57566	ProteinID:KRH57566.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000233A9CB	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:7142905..7144961

Molecular Weight (calculated)

27011.9 Da

IEP (calculated)

4.956

GRAVY (calculated)

-0.042

Length

250 amino acids

Sequence
(BLAST)

001: MALSLLCPLL ATFLFMQTMA DTSFVQSRAA FYPNSQENGT DVGACEFGSF GATVNGGDVS AASNLYRNGV GCGACYQVRC GNSALCSGNG VTVVITDQGS
101: GHNTDFILSQ RAFGRMALNT DAAASLLALG VVDIQYRRVS CSYPNKNITV KIHESSNNPH YLAFVIWFQQ GNRDITAVQI CETQNFVCKL LDRSHGAVWT
201: TTAPPSGPLS LRMLFSPEEE GEETWVVPVN KIPQDWKAGQ TYDLGVQVDQ

Best Arabidopsis Sequence Match ( AT3G45970.1 )
(BLAST)

001: MGSFLFLIVV IFLFSSSVNA CDRCLHRSKA AYFSSASALS SGACAYGSMA TSFFAGHIAA AIPSIYKDGA GCGACFQVRC KNPKLCSTKG TIVMITDLNK
101: SNQTDLVLSS RAFRAMAKPI VGADKDLLKQ GIVDIEYQRV PCDYGNKNMN VRVEEASKKP NYLEIKLLYQ GGQTEVVSID IAQVGSSPNW GYMTRSHGAV
201: WVTDKVPTGA IQFRFVVTGG YDGKMIWSQS VLPSNWEAGK IYDAGVQITD IAQEGCDPCD AHIWN

Arabidopsis Description

EXLA1Expansin-like A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZT4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.