Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017740_P001 | Maize | extracellular | 86.7 | 79.84 |
| Zm00001d017735_P001 | Maize | extracellular | 86.7 | 79.84 |
| Zm00001d017736_P001 | Maize | cytosol | 65.67 | 79.27 |
| Zm00001d017737_P001 | Maize | extracellular | 86.7 | 74.81 |
| Zm00001d017732_P001 | Maize | extracellular | 86.7 | 74.81 |
| Zm00001d017733_P001 | Maize | extracellular | 86.27 | 74.44 |
| Zm00001d040608_P001 | Maize | extracellular | 84.55 | 73.51 |
| Zm00001d048384_P001 | Maize | extracellular | 84.12 | 72.86 |
| Zm00001d040609_P001 | Maize | extracellular | 84.12 | 72.86 |
| OQU93456 | Sorghum | cytosol, extracellular | 65.67 | 72.17 |
| Zm00001d017741_P001 | Maize | extracellular | 48.5 | 71.07 |
| EER95684 | Sorghum | extracellular | 76.39 | 66.92 |
| OQU93457 | Sorghum | extracellular | 76.39 | 66.92 |
| OQU93458 | Sorghum | extracellular | 76.39 | 66.92 |
| OQU93459 | Sorghum | extracellular | 76.39 | 66.92 |
| EER95683 | Sorghum | extracellular | 76.39 | 66.92 |
| OQU93455 | Sorghum | extracellular | 72.96 | 66.41 |
| Os03t0106900-00 | Rice | extracellular | 63.09 | 55.06 |
| Os03t0106500-01 | Rice | plasma membrane | 63.09 | 55.06 |
| Os03t0106800-01 | Rice | plasma membrane | 60.94 | 53.18 |
| TraesCS4D01G355800.1 | Wheat | extracellular | 59.66 | 51.48 |
| TraesCS4D01G355100.1 | Wheat | extracellular | 59.66 | 51.48 |
| Zm00001d047147_P001 | Maize | extracellular | 59.23 | 51.3 |
| Zm00001d047146_P001 | Maize | extracellular | 59.23 | 51.3 |
| HORVU4Hr1G086830.1 | Barley | extracellular | 58.37 | 51.13 |
| TraesCS4D01G355700.1 | Wheat | extracellular | 58.8 | 51.12 |
| Zm00001d047142_P001 | Maize | extracellular | 58.8 | 50.93 |
| TraesCS5A01G530100.1 | Wheat | extracellular | 58.8 | 50.74 |
| TraesCS5A01G530700.1 | Wheat | extracellular | 58.8 | 50.74 |
| TraesCS4B01G362100.1 | Wheat | extracellular | 58.8 | 50.74 |
| Zm00001d047135_P011 | Maize | extracellular | 58.37 | 50.56 |
| TraesCS4B01G362600.1 | Wheat | extracellular, unclear | 58.37 | 50.37 |
| TraesCS4B01G362500.1 | Wheat | extracellular | 58.37 | 50.37 |
| Os03t0106700-00 | Rice | extracellular | 48.93 | 50.0 |
| HORVU4Hr1G086930.1 | Barley | extracellular | 57.94 | 49.27 |
| HORVU4Hr1G087070.2 | Barley | extracellular, mitochondrion, peroxisome | 58.37 | 48.4 |
| Zm00001d047090_P002 | Maize | extracellular | 51.93 | 44.81 |
| Zm00001d029906_P001 | Maize | extracellular | 51.5 | 44.78 |
| Zm00001d017734_P001 | Maize | cytosol | 87.12 | 44.32 |
| Zm00001d029903_P002 | Maize | extracellular | 50.21 | 43.82 |
| Zm00001d047089_P001 | Maize | extracellular | 49.79 | 43.45 |
| Zm00001d029827_P001 | Maize | extracellular | 41.2 | 41.74 |
| Zm00001d047096_P001 | Maize | extracellular | 49.79 | 41.13 |
| Zm00001d029913_P001 | Maize | extracellular | 48.5 | 40.94 |
| Zm00001d047094_P001 | Maize | extracellular | 48.93 | 40.86 |
| Zm00001d047091_P001 | Maize | extracellular | 46.78 | 39.93 |
| Zm00001d029907_P001 | Maize | extracellular | 46.35 | 39.56 |
| Zm00001d047093_P001 | Maize | extracellular | 44.64 | 39.39 |
| Zm00001d029899_P001 | Maize | extracellular, mitochondrion | 47.64 | 39.36 |
| Zm00001d027281_P001 | Maize | extracellular | 45.49 | 38.83 |
| Zm00001d047087_P001 | Maize | extracellular | 47.21 | 38.46 |
| Zm00001d027283_P001 | Maize | extracellular | 51.93 | 38.05 |
| Zm00001d004586_P001 | Maize | extracellular | 51.07 | 38.02 |
| Zm00001d026170_P001 | Maize | extracellular | 39.91 | 35.5 |
| Zm00001d051368_P001 | Maize | extracellular | 24.03 | 35.44 |
| Zm00001d026171_P001 | Maize | extracellular | 29.61 | 35.38 |
| Zm00001d045861_P001 | Maize | mitochondrion | 39.06 | 34.34 |
| Zm00001d017493_P001 | Maize | extracellular | 39.06 | 34.08 |
| Zm00001d045792_P001 | Maize | extracellular | 39.48 | 34.07 |
| Zm00001d017495_P001 | Maize | extracellular | 41.2 | 32.65 |
| Zm00001d017494_P001 | Maize | extracellular | 40.77 | 32.09 |
| Zm00001d026169_P001 | Maize | extracellular | 39.91 | 31.85 |
| Zm00001d017377_P001 | Maize | extracellular | 33.91 | 29.48 |
| Zm00001d019560_P001 | Maize | plasma membrane | 38.2 | 28.9 |
| Zm00001d019557_P001 | Maize | extracellular, plastid | 32.19 | 25.95 |
| Zm00001d002860_P002 | Maize | extracellular | 33.05 | 25.25 |
| Zm00001d027520_P001 | Maize | extracellular | 24.03 | 20.14 |
| Zm00001d048344_P002 | Maize | extracellular | 23.61 | 20.07 |
| Zm00001d029783_P003 | Maize | extracellular | 23.61 | 20.0 |
| Zm00001d006360_P001 | Maize | extracellular | 22.32 | 19.12 |
| Zm00001d014826_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 21.89 | 15.99 |
| Zm00001d033231_P003 | Maize | extracellular | 38.63 | 12.61 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:35.1 | UniProt:A0A1D6HH67 | ProteinID:AQK73901.1 | InterPro:Expan_Lol_pI |
| InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0008150 | GO:GO:0019953 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| InterPro:LolPI | PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR00829 | PRINTS:PR01225 | PFscan:PS50842 |
| PFscan:PS50843 | PANTHER:PTHR31692 | PANTHER:PTHR31692:SF21 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | UniParc:UPI0008434888 | EnsemblPlantsGene:Zm00001d017731 | EnsemblPlants:Zm00001d017731_P001 | EnsemblPlants:Zm00001d017731_T001 |
| SEG:seg | : | : | : | : | : |
Description
Expansin-B4
Coordinates
chr5:-:205527426..205528156
Molecular Weight (calculated)
25327.6 Da
IEP (calculated)
8.077
GRAVY (calculated)
-0.249
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKALVFLVS GASCGPPKVP LDWLDAKATW YGKPTGAGLD DNGGGYGYKD VNKPPFNSMG ACGNIPIFKD GLGCRPCFKI KCNKPAECSS KPMVVHITDM
101: NYEPIAVYHF DLAGTAFSAI AKKDEEEKPC KAGIVDMQFR RVKCKYGSKI TFHLEKGCNP NYLALLVKYV DGDGDIVVVD VKEKGSDTCE PLKHSWGAIW
201: RKDSDKLLKG PLTVRLIAEG GTNTIYDDVI PAN
101: NYEPIAVYHF DLAGTAFSAI AKKDEEEKPC KAGIVDMQFR RVKCKYGSKI TFHLEKGCNP NYLALLVKYV DGDGDIVVVD VKEKGSDTCE PLKHSWGAIW
201: RKDSDKLLKG PLTVRLIAEG GTNTIYDDVI PAN
001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF
Arabidopsis Description
EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.