Factsheet for Zm00001d017734_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017735_P001	Maize	extracellular	55.02	99.6
Zm00001d017732_P001	Maize	extracellular	58.52	99.26
Zm00001d017733_P001	Maize	extracellular	58.3	98.89
Zm00001d017740_P001	Maize	extracellular	53.93	97.63
Zm00001d017737_P001	Maize	extracellular	56.99	96.67
Zm00001d017736_P001	Maize	cytosol	39.96	94.82
Zm00001d017741_P001	Maize	extracellular	32.1	92.45
Zm00001d048384_P001	Maize	extracellular	52.84	89.96
Zm00001d040609_P001	Maize	extracellular	52.62	89.59
Zm00001d040608_P001	Maize	extracellular	52.4	89.55
Zm00001d017731_P001	Maize	extracellular	44.32	87.12
OQU93456	Sorghum	cytosol, extracellular	38.65	83.49
OQU93457	Sorghum	extracellular	48.25	83.08
OQU93455	Sorghum	extracellular	46.29	82.81
OQU93459	Sorghum	extracellular	48.03	82.71
OQU93458	Sorghum	extracellular	48.03	82.71
EER95683	Sorghum	extracellular	48.03	82.71
EER95684	Sorghum	extracellular	47.82	82.33
Os03t0106800-01	Rice	plasma membrane	38.65	66.29
Os03t0106500-01	Rice	plasma membrane	38.21	65.54
Os03t0106900-00	Rice	extracellular	38.21	65.54
HORVU4Hr1G086830.1	Barley	extracellular	36.46	62.78
Os03t0106700-00	Rice	extracellular	31.0	62.28
TraesCS4D01G355800.1	Wheat	extracellular	36.68	62.22
TraesCS4D01G355100.1	Wheat	extracellular	36.68	62.22
TraesCS5A01G530700.1	Wheat	extracellular	36.46	61.85
TraesCS4B01G362100.1	Wheat	extracellular	36.46	61.85
TraesCS5A01G530100.1	Wheat	extracellular	36.24	61.48
TraesCS4B01G362600.1	Wheat	extracellular, unclear	36.24	61.48
TraesCS4B01G362500.1	Wheat	extracellular	36.24	61.48
TraesCS4D01G355700.1	Wheat	extracellular	35.59	60.82
HORVU4Hr1G086930.1	Barley	extracellular	35.59	59.49
HORVU4Hr1G087070.2	Barley	extracellular, mitochondrion, peroxisome	35.81	58.36
Zm00001d047146_P001	Maize	extracellular	33.84	57.62
Zm00001d047147_P001	Maize	extracellular	33.84	57.62
Zm00001d047142_P001	Maize	extracellular	33.84	57.62
Zm00001d047135_P011	Maize	extracellular	33.62	57.25
Zm00001d029827_P001	Maize	extracellular	25.76	51.3
Zm00001d029903_P002	Maize	extracellular	29.48	50.56
Zm00001d029906_P001	Maize	extracellular	29.48	50.37
Zm00001d047090_P002	Maize	extracellular	29.69	50.37
Zm00001d047089_P001	Maize	extracellular	29.26	50.19
Zm00001d047096_P001	Maize	extracellular	29.04	47.16
Zm00001d047091_P001	Maize	extracellular	27.95	46.89
Zm00001d047093_P001	Maize	extracellular	26.86	46.59
Zm00001d027281_P001	Maize	extracellular	27.73	46.52
Zm00001d029913_P001	Maize	extracellular	27.95	46.38
Zm00001d047094_P001	Maize	extracellular	28.17	46.24
Zm00001d029899_P001	Maize	extracellular, mitochondrion	28.38	46.1
Zm00001d029907_P001	Maize	extracellular	27.29	45.79
Zm00001d047087_P001	Maize	extracellular	27.73	44.41
Zm00001d004586_P001	Maize	extracellular	29.48	43.13
Zm00001d027283_P001	Maize	extracellular	29.91	43.08
Zm00001d051368_P001	Maize	extracellular	14.85	43.04
Zm00001d026171_P001	Maize	extracellular	17.9	42.05
Zm00001d026170_P001	Maize	extracellular	23.58	41.22
Zm00001d026169_P001	Maize	extracellular	25.55	40.07
Zm00001d045861_P001	Maize	mitochondrion	22.93	39.62
Zm00001d045792_P001	Maize	extracellular	23.14	39.26
Zm00001d017494_P001	Maize	extracellular	25.11	38.85
Zm00001d017495_P001	Maize	extracellular	24.89	38.78
Zm00001d017493_P001	Maize	extracellular	22.49	38.58
Zm00001d017377_P001	Maize	extracellular	20.52	35.07
Zm00001d019560_P001	Maize	plasma membrane	23.58	35.06
Zm00001d019557_P001	Maize	extracellular, plastid	18.34	29.07
Zm00001d002860_P002	Maize	extracellular	19.21	28.85
Zm00001d029783_P003	Maize	extracellular	14.85	24.73
Zm00001d048344_P002	Maize	extracellular	14.19	23.72
Zm00001d027520_P001	Maize	extracellular	14.19	23.38
Zm00001d006360_P001	Maize	extracellular	13.76	23.16
Zm00001d014826_P001	Maize	endoplasmic reticulum, extracellular, vacuole	12.45	17.87
Zm00001d033231_P003	Maize	extracellular	22.93	14.71

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:35.1	UniProt:A0A1D6HH69	ProteinID:AQK73904.1	InterPro:Expan_Lol_pI
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0000003	GO:GO:0005575	GO:GO:0005576
GO:GO:0008150	GO:GO:0019953	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
InterPro:LolPI	PFAM:PF01357	PFAM:PF03330	PRINTS:PR00829	PRINTS:PR01225	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31692	PANTHER:PTHR31692:SF21	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	UniParc:UPI00084472A5	EnsemblPlantsGene:Zm00001d017734	EnsemblPlants:Zm00001d017734_P001	EnsemblPlants:Zm00001d017734_T001
SEG:seg	:	:	:	:	:

Description

Expansin-B4

Coordinates

chr5:-:205538280..205542962

Molecular Weight (calculated)

50000.1 Da

IEP (calculated)

8.408

GRAVY (calculated)

-0.328

Length

458 amino acids

Sequence
(BLAST)

001: MGACGNIPIF KDGLGCGSCF EIKCDKPVEC SGKPVVVHIT DMNYEPIAAY HFDLAGTAFG AMAKKGEEEK LRKAGIIDMQ FRRVKCKYDS KVTFHLEKGC
101: GPNYLALLVK YVDGDGDIVA VDVKEKGSDT YEPLKHSWGA IWRKDSDKPL KGPLTVRLTT EGGTKSVYDD AYPLIHRSIV PFTNPRQNMA VNVRTMWSSM
201: RAHVAMAVAL VFLVSGAWCG PPKVPPGKNI TATYGKDWLD AKATWYGKPT GAGPDDNGGG CGYKDVNKPP FNSMGACGNI PIFKDGLGCG SCFEIKCDKP
301: VECSGKPVVV HITDMNYEPI AAYHFDLAGT AFGAMAKKGE EEKLRKAGII DMQFRRVKCK YDSKVTFHLE KGCGPNYLAL LVKYVDGDGD IVAVDVKEKG
401: SDTYEPLKHS WGAIWRKDSD KPLKGPLTVR LTTEGGTKSV YDDVIPANWK ANTAYTAK

Best Arabidopsis Sequence Match ( AT1G65680.1 )
(BLAST)

001: MTILVVDRYY MLMNLLFALT CLLLNLTHCF SPKKFNISAA TTSDSDWSIA GSTWYGNPTG YGSDGGACGY GNAVAQPPFS KMVSAGGPSL FKSGKGCGAC
101: YQVKCTSKSA CSKNPVTVVI TDECPGCVKE SVHFDLSGTA FGAMAISGQD SQLRNVGELQ ILYKKVECNY IGKTVTFQVD KGSNANSFAV LVAYVNGDGE
201: IGRIELKQAL DSDKWLSMSQ SWGAVWKLDV SSPLRAPLSL RVTSLESGKT VVASNVIPAN WQPGAIYKSN VNF

Arabidopsis Description

EXPB2Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.