Factsheet for GSMUA_Achr7P02750_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P16080_001	Banana	mitochondrion	82.67	65.26
VIT_05s0029g00440.t01	Wine grape	mitochondrion, nucleus, plastid	65.33	64.47
Solyc09g092320.2.1	Tomato	mitochondrion, nucleus	48.0	62.07
AT3G23830.1	Thale cress	mitochondrion, plastid	53.33	58.82
PGSC0003DMT400053017	Potato	mitochondrion, plastid	59.33	58.55
KRG97345	Soybean	mitochondrion	54.67	58.16
PGSC0003DMT400040748	Potato	mitochondrion	56.0	57.93
Bra013997.1-P	Field mustard	mitochondrion	55.33	57.24
CDY47311	Canola	mitochondrion	54.67	56.94
CDY06468	Canola	mitochondrion	56.0	56.76
CDY47314	Canola	mitochondrion	56.67	56.67
CDY53035	Canola	mitochondrion	56.67	56.29
Bra037056.1-P	Field mustard	mitochondrion	56.0	56.0
Solyc05g053780.2.1	Tomato	mitochondrion	59.33	55.28
CDY08312	Canola	mitochondrion	56.0	54.9
AT4G13850.1	Thale cress	mitochondrion	56.67	53.8
KRH31570	Soybean	mitochondrion	44.67	46.21
Bra014000.1-P	Field mustard	mitochondrion	57.33	38.74
GSMUA_Achr2P19090_001	Banana	mitochondrion	27.33	38.68
GSMUA_Achr11P...	Banana	mitochondrion	33.33	37.88
GSMUA_Achr7P27650_001	Banana	nucleus	33.33	37.59
GSMUA_Achr6P34250_001	Banana	mitochondrion	27.33	37.27
GSMUA_Achr4P14550_001	Banana	nucleus	38.0	36.08
GSMUA_Achr3P30570_001	Banana	plasma membrane	40.0	35.29
GSMUA_Achr8P05200_001	Banana	cytosol	36.0	34.84
GSMUA_Achr9P07090_001	Banana	mitochondrion	54.67	34.45
GSMUA_Achr11P...	Banana	mitochondrion	23.33	32.41
GSMUA_Achr6P35640_001	Banana	nucleus	30.0	32.37
GSMUA_Achr5P26410_001	Banana	cytosol, mitochondrion, nucleus	23.33	30.43
GSMUA_Achr4P03230_001	Banana	mitochondrion	51.33	30.08
GSMUA_Achr8P07380_001	Banana	mitochondrion	26.0	28.89
GSMUA_Achr6P15340_001	Banana	plastid	29.33	25.0
GSMUA_Achr5P26170_001	Banana	nucleus, peroxisome, plasma membrane	25.33	22.62
GSMUA_Achr8P07840_001	Banana	mitochondrion, nucleus, plasma membrane	27.33	21.47
GSMUA_Achr3P22540_001	Banana	nucleus, peroxisome, plasma membrane	29.33	21.46
GSMUA_Achr5P15860_001	Banana	plastid	23.33	20.59
GSMUA_Achr2P12550_001	Banana	nucleus	26.67	17.86
GSMUA_Achr4P22370_001	Banana	nucleus	32.67	15.76
GSMUA_Achr4P28550_001	Banana	cytosol, mitochondrion, nucleus	33.33	14.49
GSMUA_Achr2P01230_001	Banana	nucleus	26.67	12.82

Protein Annotations

EnsemblPlants:GSMUA_Achr7P02750_001	EnsemblPlants:GSMUA_Achr7T02750_001	EnsemblPlantsGene:GSMUA_Achr7G02750_001	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf
InterPro:RRM_dom	PANTHER:PTHR44202	PFAM:PF00076	PFscan:PS50102	SEG:seg	SMART:SM00360
SUPFAM:SSF54928	UniParc:UPI000294A2F3	UniProt:M0TE65	MapMan:16.12.5.2	:	:

Description

Glycine-rich RNA-binding protein 2, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr7G02750_001]

Coordinates

chr7:-:2218530..2221412

Molecular Weight (calculated)

15495.9 Da

IEP (calculated)

7.511

GRAVY (calculated)

-0.411

Length

150 amino acids

Sequence
(BLAST)

001: MAFSSKLGGL IRQGLLKNGI SGAPSGAMHL LNSMRYMSSK LFVGGLSYGT DDQQLKEAFN SFGEVVEARV ITDRDTGKSR GFGFVSFDSD ESASSALTSM
101: DGQELQGRNI RVSYANERPS GGSRGGFGGG YGGSGGYGGS AGYGGGQNDF

Best Arabidopsis Sequence Match ( AT3G23830.1 )
(BLAST)

001: MAFCNKLSGI LRQGVSQSSN GPVTSMLGSL RYMSSKLFVG GLSWGTDDSS LKQAFTSFGE VTEATVIADR ETGRSRGFGF VSFSCEDSAN NAIKEMDGKE
101: LNGRQIRVNL ATERSSAPRS SFGGGGGYGG GGGGGY

Arabidopsis Description

RBG4GRP4 [Source:UniProtKB/TrEMBL;Acc:A0A178VD35]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.