Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013997.1-P Field mustard mitochondrion 95.33 98.62
CDY47311 Canola mitochondrion 94.67 98.61
CDY53035 Canola mitochondrion 98.67 98.01
CDY06468 Canola mitochondrion 88.67 89.86
CDY08312 Canola mitochondrion 88.0 86.27
AT4G13850.1 Thale cress mitochondrion 82.0 77.85
Solyc09g092320.2.1 Tomato mitochondrion, nucleus 48.0 62.07
PGSC0003DMT400040748 Potato mitochondrion 59.33 61.38
KRG97345 Soybean mitochondrion 56.67 60.28
Solyc05g053780.2.1 Tomato mitochondrion 63.33 59.01
VIT_05s0029g00440.t01 Wine grape mitochondrion, nucleus, plastid 59.33 58.55
GSMUA_Achr7P02750_001 Banana mitochondrion 56.67 56.67
PGSC0003DMT400053017 Potato mitochondrion, plastid 56.0 55.26
GSMUA_Achr4P16080_001 Banana mitochondrion 63.33 50.0
CDY41969 Canola cytosol 41.33 48.44
CDY46213 Canola nucleus 39.33 48.36
KRH31570 Soybean mitochondrion 45.33 46.9
CDY42616 Canola cytosol 48.0 45.86
CDX90323 Canola plastid 47.33 43.03
CDY70933 Canola nucleus 47.33 42.26
CDY15876 Canola nucleus 47.33 42.01
CDY59763 Canola nucleus 46.67 41.92
CDX71276 Canola nucleus 48.0 41.86
CDY19230 Canola mitochondrion 38.67 41.73
CDY12133 Canola cytosol 43.33 41.14
CDY72366 Canola nucleus 46.67 40.94
CDX82164 Canola mitochondrion 39.33 40.69
CDY26743 Canola mitochondrion 40.0 40.54
CDY51614 Canola mitochondrion 36.0 37.24
CDY09244 Canola mitochondrion 25.33 36.54
CDY28003 Canola plastid 33.33 34.72
CDY31588 Canola nucleus 17.33 33.33
CDX74955 Canola plastid 32.0 33.1
CDX91368 Canola plastid 32.0 33.1
CDY35978 Canola mitochondrion, plastid 30.0 31.47
CDX82066 Canola cytosol, nucleus, plastid 19.33 30.21
CDY14089 Canola mitochondrion 29.33 30.14
CDY04982 Canola mitochondrion 29.33 30.14
CDY42426 Canola mitochondrion 48.0 29.75
CDY49123 Canola mitochondrion 52.0 29.32
CDX73070 Canola mitochondrion 51.33 28.52
CDX96526 Canola mitochondrion 52.0 28.06
CDY16825 Canola plastid 48.67 27.76
CDY43035 Canola plastid 28.0 27.45
CDY42466 Canola plastid 28.0 27.45
CDY64931 Canola plastid 28.0 27.45
CDY65478 Canola endoplasmic reticulum 37.33 26.92
CDY43820 Canola plastid 28.0 26.75
CDX83260 Canola mitochondrion 20.67 23.13
CDY31170 Canola mitochondrion, nucleus 20.0 22.73
CDY02175 Canola mitochondrion 50.67 22.42
CDX87197 Canola plastid 48.67 22.19
CDX71070 Canola mitochondrion 22.0 21.71
CDX83617 Canola nucleus 33.33 21.55
CDY13632 Canola nucleus 34.0 21.34
CDY52166 Canola nucleus 34.0 20.99
CDY48990 Canola nucleus 34.0 20.99
CDY11283 Canola nucleus 30.67 15.03
CDY34132 Canola nucleus 22.67 13.33
CDX80910 Canola nucleus 22.0 12.64
CDY19589 Canola plastid 28.67 11.53
CDY06395 Canola nucleus 28.0 10.55
Protein Annotations
MapMan:16.12.5.2MapMan:16.7.2Gene3D:3.30.70.330GO:A0A078ID76UniProt:A0A078ID76EnsemblPlants:CDY47314
ProteinID:CDY47314ProteinID:CDY47314.1GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0005488
EnsemblPlantsGene:GSBRNA2T00087151001InterPro:IPR000504InterPro:IPR012677InterPro:Nucleotide-bd_a/b_plait_sfPFAM:PF00076PFscan:PS50102
PANTHER:PTHR44202InterPro:RBD_domain_sfInterPro:RRM_domSMART:SM00360SUPFAM:SSF54928UniParc:UPI0004EE40CF
SEG:seg:::::
Description
BnaAnng08880DBnaAnng08880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID76]
Coordinates
chrLK032708:-:97701..98794
Molecular Weight (calculated)
15250.7 Da
IEP (calculated)
6.683
GRAVY (calculated)
-0.346
Length
150 amino acids
Sequence
(BLAST)
001: MAFCKSLGGL LRQGAVSQTG NVPVQSMLGS LRYMSTKLFV GGLSWGTDDQ SLREAFSNFG EVIDSKVIVD RETGRSRGFG FVNFSDETAA NAAISEMDGK
101: ELNGRNIRVN VANDRPSAPR AYGGGGGYGG GGGYGGGGGG YGGGGDGGGY
Best Arabidopsis Sequence Match ( AT4G13850.1 )
(BLAST)
001: MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSGG GGGYGGGGGG YGGGGGGYGG GGDGGGGF
Arabidopsis Description
RBG2Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.