Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035944.1-P | Field mustard | plastid | 75.99 | 95.06 |
| CDY16825 | Canola | plastid | 75.68 | 94.68 |
| CDY02175 | Canola | mitochondrion | 72.34 | 70.21 |
| AT5G61030.1 | Thale cress | mitochondrion | 63.22 | 67.31 |
| GSMUA_Achr9P07090_001 | Banana | mitochondrion | 38.91 | 53.78 |
| CDX82164 | Canola | mitochondrion | 22.8 | 51.72 |
| CDY06468 | Canola | mitochondrion | 22.49 | 50.0 |
| VIT_17s0000g07330.t01 | Wine grape | plastid | 41.95 | 49.82 |
| CDY53035 | Canola | mitochondrion | 22.49 | 49.01 |
| CDY51614 | Canola | mitochondrion | 21.58 | 48.97 |
| CDX73070 | Canola | mitochondrion | 40.12 | 48.89 |
| CDY47314 | Canola | mitochondrion | 22.19 | 48.67 |
| CDY08312 | Canola | mitochondrion | 22.49 | 48.37 |
| CDY42426 | Canola | mitochondrion | 35.26 | 47.93 |
| CDY47311 | Canola | mitochondrion | 20.97 | 47.92 |
| CDX96526 | Canola | mitochondrion | 40.12 | 47.48 |
| TraesCS3D01G424100.1 | Wheat | mitochondrion | 31.31 | 47.03 |
| CDY49123 | Canola | mitochondrion | 37.99 | 46.99 |
| GSMUA_Achr4P03230_001 | Banana | mitochondrion | 36.47 | 46.88 |
| TraesCS3A01G428400.1 | Wheat | mitochondrion | 31.91 | 46.46 |
| EES16016 | Sorghum | mitochondrion | 35.26 | 46.4 |
| CDY15876 | Canola | nucleus | 23.71 | 46.15 |
| CDY72366 | Canola | nucleus | 23.71 | 45.61 |
| TraesCS3B01G465800.1 | Wheat | mitochondrion | 31.91 | 45.45 |
| Os12t0502200-01 | Rice | mitochondrion | 35.56 | 45.35 |
| Zm00001d041750_P001 | Maize | mitochondrion | 35.56 | 44.83 |
| CDY26743 | Canola | mitochondrion | 20.06 | 44.59 |
| CDY42616 | Canola | cytosol | 21.28 | 44.59 |
| CDY12133 | Canola | cytosol | 21.28 | 44.3 |
| KRH56813 | Soybean | mitochondrion | 36.78 | 44.16 |
| CDX90323 | Canola | plastid | 21.88 | 43.64 |
| CDY46213 | Canola | nucleus | 16.11 | 43.44 |
| PGSC0003DMT400064758 | Potato | mitochondrion | 33.13 | 43.43 |
| KRH03133 | Soybean | nucleus | 36.17 | 43.27 |
| CDY59763 | Canola | nucleus | 21.88 | 43.11 |
| CDY41969 | Canola | cytosol | 16.72 | 42.97 |
| Solyc02g066930.2.1 | Tomato | nucleus | 27.96 | 42.59 |
| CDY19230 | Canola | mitochondrion | 17.93 | 42.45 |
| CDY70933 | Canola | nucleus | 21.58 | 42.26 |
| HORVU5Hr1G110370.1 | Barley | mitochondrion | 37.39 | 41.98 |
| TraesCS5D01G473100.1 | Wheat | mitochondrion | 38.91 | 41.83 |
| TraesCS5B01G470700.1 | Wheat | mitochondrion | 38.6 | 41.37 |
| Zm00001d023734_P003 | Maize | nucleus, plastid | 35.56 | 40.77 |
| CDX71276 | Canola | nucleus | 21.28 | 40.7 |
| TraesCS5A01G460900.1 | Wheat | mitochondrion | 37.39 | 40.33 |
| HORVU3Hr1G094330.2 | Barley | mitochondrion | 35.56 | 38.24 |
| Os10t0321700-01 | Rice | mitochondrion | 36.78 | 38.17 |
| Os07t0602600-01 | Rice | mitochondrion | 27.05 | 37.4 |
| CDY31588 | Canola | nucleus | 8.81 | 37.18 |
| TraesCS2B01G203200.1 | Wheat | mitochondrion | 35.26 | 36.36 |
| TraesCS2D01G184200.1 | Wheat | mitochondrion | 35.87 | 36.31 |
| Zm00001d022065_P001 | Maize | mitochondrion | 33.43 | 35.71 |
| CDY28003 | Canola | plastid | 15.2 | 34.72 |
| PGSC0003DMT400003685 | Potato | nucleus | 31.91 | 34.65 |
| KXG36643 | Sorghum | mitochondrion | 33.13 | 34.49 |
| Solyc02g088790.2.1 | Tomato | extracellular, plastid | 37.08 | 32.71 |
| CDY09244 | Canola | mitochondrion | 10.33 | 32.69 |
| CDY35978 | Canola | mitochondrion, plastid | 13.98 | 32.17 |
| CDY04982 | Canola | mitochondrion | 13.68 | 30.82 |
| CDY14089 | Canola | mitochondrion | 13.37 | 30.14 |
| CDY65478 | Canola | endoplasmic reticulum | 18.54 | 29.33 |
| CDX83260 | Canola | mitochondrion | 11.55 | 28.36 |
| CDY31170 | Canola | mitochondrion, nucleus | 11.25 | 28.03 |
| CDX74955 | Canola | plastid | 12.16 | 27.59 |
| CDX91368 | Canola | plastid | 12.16 | 27.59 |
| CDY48990 | Canola | nucleus | 18.54 | 25.1 |
| CDX83617 | Canola | nucleus | 17.63 | 25.0 |
| CDX82066 | Canola | cytosol, nucleus, plastid | 7.29 | 25.0 |
| CDY64931 | Canola | plastid | 11.55 | 24.84 |
| CDY42466 | Canola | plastid | 11.55 | 24.84 |
| CDY52166 | Canola | nucleus | 18.24 | 24.69 |
| CDX71070 | Canola | mitochondrion | 11.25 | 24.34 |
| CDY13632 | Canola | nucleus | 17.63 | 24.27 |
| CDY43035 | Canola | plastid | 10.94 | 23.53 |
| CDY43820 | Canola | plastid | 10.94 | 22.93 |
| KRH54698 | Soybean | plastid | 38.91 | 18.99 |
| CDY11283 | Canola | nucleus | 16.41 | 17.65 |
| CDY34132 | Canola | nucleus | 13.68 | 17.65 |
| CDX80910 | Canola | nucleus | 12.77 | 16.09 |
| TraesCS2A01G176700.1 | Wheat | mitochondrion | 33.43 | 15.01 |
| CDY19589 | Canola | plastid | 10.64 | 9.38 |
| CDY06395 | Canola | nucleus | 11.25 | 9.3 |
Protein Annotations
| EnsemblPlants:CDX87197 | EnsemblPlantsGene:GSBRNA2T00146123001 | Gene3D:3.30.70.330 | GO:A0A078DDS2 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR45502 | PFAM:PF00076 | PFscan:PS50102 | ProteinID:CDX87197 | ProteinID:CDX87197.1 | SEG:seg |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EE920C | MapMan:16.12.5.2 | : | : |
Description
BnaC09g05120D
Coordinates
chrLK031849:+:1123528..1125437
Molecular Weight (calculated)
32981.8 Da
IEP (calculated)
7.109
GRAVY (calculated)
-0.383
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFSQLLAPH YLHLHYINSS SKGHNTGRVL AEAKNQRGLR GTCSSPVKFC LQVRCLKAMA FLSKFGNVLK QTTSKQLSAN GSLSSPSLFQ AIRCMSSSKL
101: FIGGMEYGMN EDSLREAFSK YGEVVETRVI LDRETGRSRG FGFVTFTSTE AASSAIQALD GQDLHGRIVK VNYAHDRTSG GGGYGGGGYG GGGYGGGGGG
201: SGGYGGGGAG GYGGGGYGTS VGYGSSGYGE SSTASAGAVG GYNGSGGYGE GSTANAGAVG GYGSGNAYGS NNGGFAGENQ VGGDNSQFSG ENTQFGVGGG
301: QSGGEAQFGG LENGAVGDFE DDTDVAKRA
101: FIGGMEYGMN EDSLREAFSK YGEVVETRVI LDRETGRSRG FGFVTFTSTE AASSAIQALD GQDLHGRIVK VNYAHDRTSG GGGYGGGGYG GGGYGGGGGG
201: SGGYGGGGAG GYGGGGYGTS VGYGSSGYGE SSTASAGAVG GYNGSGGYGE GSTANAGAVG GYGSGNAYGS NNGGFAGENQ VGGDNSQFSG ENTQFGVGGG
301: QSGGEAQFGG LENGAVGDFE DDTDVAKRA
001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
Arabidopsis Description
RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.