Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 8
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0916600-01 | Rice | mitochondrion | 29.83 | 47.33 |
| Os01t0502800-01 | Rice | mitochondrion | 10.08 | 45.28 |
| VIT_17s0000g07330.t01 | Wine grape | plastid | 48.32 | 41.52 |
| GSMUA_Achr9P07090_001 | Banana | mitochondrion | 41.18 | 41.18 |
| Os12t0502200-01 | Rice | mitochondrion | 44.54 | 41.09 |
| Zm00001d022065_P001 | Maize | mitochondrion | 50.84 | 39.29 |
| Os12t0632000-01 | Rice | nucleus | 26.47 | 38.89 |
| KXG36643 | Sorghum | mitochondrion | 51.26 | 38.61 |
| GSMUA_Achr4P03230_001 | Banana | mitochondrion | 41.18 | 38.28 |
| KRH03133 | Soybean | nucleus | 43.7 | 37.82 |
| Solyc02g066930.2.1 | Tomato | nucleus | 34.03 | 37.5 |
| TraesCS2B01G203200.1 | Wheat | mitochondrion | 48.74 | 36.36 |
| TraesCS2D01G184200.1 | Wheat | mitochondrion | 49.58 | 36.31 |
| PGSC0003DMT400064758 | Potato | mitochondrion | 38.24 | 36.26 |
| KRH56813 | Soybean | mitochondrion | 40.76 | 35.4 |
| Os10t0321700-01 | Rice | mitochondrion | 47.06 | 35.33 |
| CDY16825 | Canola | plastid | 38.66 | 34.98 |
| Bra035944.1-P | Field mustard | plastid | 38.24 | 34.6 |
| Os01t0974701-01 | Rice | mitochondrion | 16.39 | 33.62 |
| Bra012986.1-P | Field mustard | mitochondrion | 42.44 | 33.11 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 33.61 | 32.79 |
| AT5G61030.1 | Thale cress | mitochondrion | 42.44 | 32.69 |
| Os07t0549800-01 | Rice | mitochondrion | 17.65 | 31.58 |
| KRH45033 | Soybean | nucleus, plastid | 32.35 | 31.43 |
| Os04t0414300-00 | Rice | mitochondrion | 18.07 | 31.39 |
| Os03t0670700-01 | Rice | nucleus | 25.21 | 30.61 |
| PGSC0003DMT400003685 | Potato | nucleus | 38.24 | 30.03 |
| CDY02175 | Canola | mitochondrion | 42.02 | 29.5 |
| Solyc02g088790.2.1 | Tomato | extracellular, plastid | 42.44 | 27.08 |
| CDX87197 | Canola | plastid | 37.4 | 27.05 |
| Os08t0139000-02 | Rice | mitochondrion | 15.97 | 26.95 |
| Os03t0836200-03 | Rice | nucleus | 22.69 | 26.34 |
| Os03t0278800-00 | Rice | plastid | 18.49 | 25.43 |
| Os04t0583800-01 | Rice | plastid | 9.66 | 19.49 |
| Os03t0681900-01 | Rice | nucleus | 21.43 | 16.56 |
| TraesCS2A01G176700.1 | Wheat | mitochondrion | 50.0 | 16.23 |
| KRH54698 | Soybean | plastid | 42.02 | 14.84 |
| Os02t0730800-01 | Rice | plastid | 16.39 | 9.77 |
Protein Annotations
| MapMan:16.12.5.2 | Gene3D:3.30.70.330 | EntrezGene:4343831 | ProteinID:BAF22120.1 | ProteinID:BAT02530.1 | ProteinID:EEE67543.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 |
| InterPro:Nucleotide-bd_a/b_plait_sf | EnsemblPlantsGene:Os07g0602600 | EnsemblPlants:Os07t0602600-01 | PFAM:PF00076 | PRINTS:PR01228 | PFscan:PS50102 |
| PANTHER:PTHR44202 | PANTHER:PTHR44202:SF2 | UniProt:Q0D4V3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI0000E12BDC | RefSeq:XP_015645572.1 | SEG:seg | : | : |
Description
Similar to RNA binding protein. (Os07t0602600-01)
Coordinates
chr7:-:24611198..24614117
Molecular Weight (calculated)
23565.7 Da
IEP (calculated)
8.743
GRAVY (calculated)
-0.406
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAGRVVNA LRRTSVSSNP SLLQAVRCMS SKLFVGGLSY ATDDTTLKDV FSHYGDVLEA RIIIDRDTGK SKGYGFITYT SSEEAAAAVT AMDGKDLQGR
101: IVRVSTANDR AGGIRGGGGF GAGGYGSGGG YSSGGGYGTG EYGRGGGYAG NGGYGGRASE YGGYGAGGYS SSGGYNATSV LHGNAGGYGS SGVSHGNAGD
201: YRSSDVYNTT NTYGAGNFSH SGQSGGSFGG NNGGISGG
101: IVRVSTANDR AGGIRGGGGF GAGGYGSGGG YSSGGGYGTG EYGRGGGYAG NGGYGGRASE YGGYGAGGYS SSGGYNATSV LHGNAGGYGS SGVSHGNAGD
201: YRSSDVYNTT NTYGAGNFSH SGQSGGSFGG NNGGISGG
001: MAFCNKLGGL LRQNISSNGN VPVTSMLGSL RLMSTKLFIG GLSWGTDDAS LRDAFAHFGD VVDAKVIVDR ETGRSRGFGF VNFNDEGAAT AAISEMDGKE
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSGG GGGYGGGGGG YGGGGGGYGG GGDGGGGF
101: LNGRHIRVNP ANDRPSAPRA YGGGGGYSGG GGGYGGGGGG YGGGGGGYGG GGDGGGGF
Arabidopsis Description
RBG2Glycine-rich RNA-binding protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SVM8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.