Factsheet for Os02t0730800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G273200.1	Wheat	plastid	73.43	75.13
TraesCS6B01G322400.1	Wheat	plastid	72.68	74.74
TraesCS6A01G292000.1	Wheat	plastid	72.68	74.74
KXG30823	Sorghum	plastid	72.43	72.07
GSMUA_Achr2P01230_001	Banana	nucleus	52.38	66.99
Zm00001d017930_P003	Maize	plastid	68.17	66.18
VIT_13s0106g00500.t01	Wine grape	plastid	51.38	50.12
KRG92035	Soybean	plastid	48.62	49.74
Bra031244.1-P	Field mustard	plastid	46.12	49.33
CDY19589	Canola	plastid	45.86	49.06
AT3G20930.2	Thale cress	plastid	45.61	48.02
Solyc11g007160.1.1	Tomato	plastid	48.12	48.0
PGSC0003DMT400050134	Potato	plastid	47.37	47.25
CDY06395	Canola	nucleus	46.62	46.73
Os01t0502800-01	Rice	mitochondrion	4.76	35.85
Os04t0414300-00	Rice	mitochondrion	10.28	29.93
Os07t0549800-01	Rice	mitochondrion	9.52	28.57
Os01t0974701-01	Rice	mitochondrion	8.02	27.59
Os03t0278800-00	Rice	plastid	11.53	26.59
Os12t0632000-01	Rice	nucleus	9.52	23.46
Os08t0139000-02	Rice	mitochondrion	8.27	23.4
Os01t0916600-01	Rice	mitochondrion	8.27	22.0
Os04t0583800-01	Rice	plastid	6.02	20.34
Os03t0670700-01	Rice	nucleus	8.77	17.86
Os07t0602600-01	Rice	mitochondrion	9.77	16.39
Os03t0836200-03	Rice	nucleus	8.27	16.1
Os12t0502200-01	Rice	mitochondrion	9.52	14.73
Os03t0681900-01	Rice	nucleus	8.77	11.36
Os10t0321700-01	Rice	mitochondrion	7.52	9.46

Protein Annotations

MapMan:16.12.5.2	Gene3D:3.30.70.330	EntrezGene:4330618	ProteinID:BAD15930.1	ProteinID:BAD16369.1	ProteinID:BAF09930.1
ProteinID:BAS80750.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006397	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016554	InterPro:IPR000504
InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	EnsemblPlantsGene:Os02g0730800	EnsemblPlants:Os02t0730800-01	PFAM:PF00076	PFscan:PS50102
PANTHER:PTHR31346	PANTHER:PTHR31346:SF9	UniProt:Q6YWP9	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360
SUPFAM:SSF54928	SignalP:SignalP-noTM	UniParc:UPI0000358BFA	RefSeq:XP_015623071.1	SEG:seg	:

Description

ORRM1Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0730800-01)

Coordinates

chr2:+:30444949..30448020

Molecular Weight (calculated)

43550.1 Da

IEP (calculated)

6.589

GRAVY (calculated)

-0.415

Length

399 amino acids

Sequence
(BLAST)

001: MDAARASLLL AGGLAVSTST SAVATAAQTV SIPHLSPHTR RRRQRRFLRL ASAAASSPPP LPAASAQPHC SRWVVVMERP PAPAGGGEVS RAEAVDHYVA
101: TLARVLGSQE EAQMRIYDAS WDGSYEFSCE IDDEASRDLA KMPGVLAVKP DTDKVDMSEK DNHGSGLSAA NLGNFSDAVS NHSSSSGENE FWLVRMEKPG
201: VEVVTKAQMV DHYTQTLMKV LGNEKDAQVS IYHISWERDY GFCCHIDEEC AKELADVSGV LSVQPDTNFG SDNKNYKGDD SFKSSEATQA EVKTKRLFVT
301: GLSFYTSEKT LRAAFEPFGE LVEVKIIMDK ISKRSKGYAF IEYTTEEAGG AALKAMNGQI INGWMIVVDV AKHRSRDRQP PYSASGRSNQ VLRSRYHTG

Best Arabidopsis Sequence Match ( AT3G20930.1 )
(BLAST)

001: MEALIASTSF FVPISNSSSS HIINNRFFPS FYSPNLNFGT FRKTSLSSSH LVFSSSAISA PPSSTVLTRN SYWMVLLDKP PHWVSSKSAM VDYYVEILAK
101: VLGNEKDAQV SIYDASFDTH FGFCCHIDED ASRQLASLPG VVSIRPEQDY SSEKKNYGIG SHKGVSLFDH GTVKHWMVRI DKPGVGIVTK AQMVDHCVQL
201: LSKVLWNEKD AQMCLYHVSW QSDFGFCCDL DERSAVELAG VPGVLAVVPD NSFESLNKDY EGDSTQDSRD QDDSESPPVK TKKLFITGLS FYTSEKTLRA
301: AFEGFGELVE VKIIMDKISK RSKGYAFLEY TTEEAAGTAL KEMNGKIING WMIVVDVAKT KPFRQNRSQP SFGL

Arabidopsis Description

RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPX6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.