Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031244.1-P | Field mustard | plastid | 99.2 | 99.2 |
| CDY06395 | Canola | nucleus | 94.37 | 88.44 |
| AT3G20930.2 | Thale cress | plastid | 81.5 | 80.21 |
| GSMUA_Achr2P01230_001 | Banana | nucleus | 51.21 | 61.22 |
| KRG92035 | Soybean | plastid | 57.37 | 54.87 |
| VIT_13s0106g00500.t01 | Wine grape | plastid | 56.3 | 51.34 |
| Solyc11g007160.1.1 | Tomato | plastid | 53.08 | 49.5 |
| PGSC0003DMT400050134 | Potato | plastid | 52.81 | 49.25 |
| TraesCS6B01G322400.1 | Wheat | plastid | 49.6 | 47.68 |
| TraesCS6A01G292000.1 | Wheat | plastid | 49.6 | 47.68 |
| TraesCS6D01G273200.1 | Wheat | plastid | 48.53 | 46.41 |
| KXG30823 | Sorghum | plastid | 49.6 | 46.13 |
| Os02t0730800-01 | Rice | plastid | 49.06 | 45.86 |
| Zm00001d017930_P003 | Maize | plastid | 46.92 | 42.58 |
| CDX82066 | Canola | cytosol, nucleus, plastid | 10.46 | 40.62 |
| CDY09244 | Canola | mitochondrion | 8.58 | 30.77 |
| CDY06468 | Canola | mitochondrion | 12.06 | 30.41 |
| CDY04982 | Canola | mitochondrion | 11.8 | 30.14 |
| CDY14089 | Canola | mitochondrion | 11.8 | 30.14 |
| CDY47311 | Canola | mitochondrion | 11.53 | 29.86 |
| CDY31588 | Canola | nucleus | 6.17 | 29.49 |
| CDY08312 | Canola | mitochondrion | 12.06 | 29.41 |
| CDX74955 | Canola | plastid | 11.26 | 28.97 |
| CDX91368 | Canola | plastid | 11.26 | 28.97 |
| CDY64931 | Canola | plastid | 11.8 | 28.76 |
| CDY42466 | Canola | plastid | 11.8 | 28.76 |
| CDY47314 | Canola | mitochondrion | 11.53 | 28.67 |
| CDY53035 | Canola | mitochondrion | 11.53 | 28.48 |
| CDY43035 | Canola | plastid | 11.26 | 27.45 |
| CDY46213 | Canola | nucleus | 8.85 | 27.05 |
| CDY43820 | Canola | plastid | 11.26 | 26.75 |
| CDY19230 | Canola | mitochondrion | 9.38 | 25.18 |
| CDY35978 | Canola | mitochondrion, plastid | 9.38 | 24.48 |
| CDY28003 | Canola | plastid | 9.38 | 24.31 |
| CDY31170 | Canola | mitochondrion, nucleus | 8.31 | 23.48 |
| CDX82164 | Canola | mitochondrion | 9.12 | 23.45 |
| CDY41969 | Canola | cytosol | 8.04 | 23.44 |
| CDX83260 | Canola | mitochondrion | 8.31 | 23.13 |
| CDY26743 | Canola | mitochondrion | 9.12 | 22.97 |
| CDY51614 | Canola | mitochondrion | 8.58 | 22.07 |
| CDX71070 | Canola | mitochondrion | 8.85 | 21.71 |
| CDY72366 | Canola | nucleus | 9.65 | 21.05 |
| CDY15876 | Canola | nucleus | 9.38 | 20.71 |
| CDY42616 | Canola | cytosol | 8.04 | 19.11 |
| CDY12133 | Canola | cytosol | 8.04 | 18.99 |
| CDX90323 | Canola | plastid | 8.31 | 18.79 |
| CDX71276 | Canola | nucleus | 8.58 | 18.6 |
| CDY70933 | Canola | nucleus | 8.31 | 18.45 |
| CDY59763 | Canola | nucleus | 8.04 | 17.96 |
| CDX83617 | Canola | nucleus | 10.19 | 16.38 |
| CDY13632 | Canola | nucleus | 10.19 | 15.9 |
| CDY65478 | Canola | endoplasmic reticulum | 8.85 | 15.87 |
| CDY42426 | Canola | mitochondrion | 10.19 | 15.7 |
| CDY52166 | Canola | nucleus | 10.19 | 15.64 |
| CDY48990 | Canola | nucleus | 9.92 | 15.23 |
| CDY49123 | Canola | mitochondrion | 10.46 | 14.66 |
| CDX73070 | Canola | mitochondrion | 10.19 | 14.07 |
| CDX96526 | Canola | mitochondrion | 10.19 | 13.67 |
| CDY16825 | Canola | plastid | 9.38 | 13.31 |
| CDY02175 | Canola | mitochondrion | 9.92 | 10.91 |
| CDX87197 | Canola | plastid | 9.38 | 10.64 |
| CDY11283 | Canola | nucleus | 6.97 | 8.5 |
| CDY34132 | Canola | nucleus | 5.36 | 7.84 |
| CDX80910 | Canola | nucleus | 3.75 | 5.36 |
Protein Annotations
| MapMan:16.12.5.2 | Gene3D:3.30.70.330 | GO:A0A078G2D6 | UniProt:A0A078G2D6 | EnsemblPlants:CDY19589 | ProteinID:CDY19589 |
| ProteinID:CDY19589.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016554 | EnsemblPlantsGene:GSBRNA2T00009253001 | InterPro:IPR000504 |
| InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF9 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EDF586 | SEG:seg |
Description
BnaA05g19970DBnaA05g19970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2D6]
Coordinates
chrLK032098:-:311031..313051
Molecular Weight (calculated)
41348.9 Da
IEP (calculated)
6.114
GRAVY (calculated)
-0.253
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAFIASASF FLPFSNSPSL TLNNPSSSFS PNIKFGTFRK NYISFSSHLV YSSSAVSAPS SSTTLSQNTY WMVVLDKPPQ GVSSKSDIVD YYVEILAKVL
101: GNSEKDAQMS IYDASFDTHF GFCCHIDEDA SRQLARLPGV LSVRPEAGYS SGNKNYGIGN QTGVSLFDHG TVKHWMVRID KPGVGIVTKA QMVDHCVQLL
201: SKVLWNEKDA QMCLYHVSWK SKFGFCCDLD ETCAEELAGV PGVLAVVPDN KFESLNKDYE GDNSTQEDSR ESSESPPVKT KKLFITGLSF YTSEKTLRAA
301: FEGFGELVEV KIIMDKISKR SKGYAFIEYT TEEAASVALE EMNGKIINGW MIVVDVAKTK PFRHKRRETS SEL
101: GNSEKDAQMS IYDASFDTHF GFCCHIDEDA SRQLARLPGV LSVRPEAGYS SGNKNYGIGN QTGVSLFDHG TVKHWMVRID KPGVGIVTKA QMVDHCVQLL
201: SKVLWNEKDA QMCLYHVSWK SKFGFCCDLD ETCAEELAGV PGVLAVVPDN KFESLNKDYE GDNSTQEDSR ESSESPPVKT KKLFITGLSF YTSEKTLRAA
301: FEGFGELVEV KIIMDKISKR SKGYAFIEYT TEEAASVALE EMNGKIINGW MIVVDVAKTK PFRHKRRETS SEL
001: MEALIASTSF FVPISNSSSS HIINNRFFPS FYSPNLNFGT FRKTSLSSSH LVFSSSAISA PPSSTVLTRN SYWMVLLDKP PHWVSSKSAM VDYYVEILAK
101: VLGNEKDAQV SIYDASFDTH FGFCCHIDED ASRQLASLPG VVSIRPEQDY SSEKKNYGIG SHKGVSLFDH GTVKHWMVRI DKPGVGIVTK AQMVDHCVQL
201: LSKVLWNEKD AQMCLYHVSW QSDFGFCCDL DERSAVELAG VPGVLAVVPD NSFESLNKDY EGDSTQDSRD QDDSESPPVK TKKLFITGLS FYTSEKTLRA
301: AFEGFGELVE VKIIMDKISK RSKGYAFLEY TTEEAAGTAL KEMNGKIING WMIVVDVAKT KPFRQNRSQP SFGL
101: VLGNEKDAQV SIYDASFDTH FGFCCHIDED ASRQLASLPG VVSIRPEQDY SSEKKNYGIG SHKGVSLFDH GTVKHWMVRI DKPGVGIVTK AQMVDHCVQL
201: LSKVLWNEKD AQMCLYHVSW QSDFGFCCDL DERSAVELAG VPGVLAVVPD NSFESLNKDY EGDSTQDSRD QDDSESPPVK TKKLFITGLS FYTSEKTLRA
301: AFEGFGELVE VKIIMDKISK RSKGYAFLEY TTEEAAGTAL KEMNGKIING WMIVVDVAKT KPFRQNRSQP SFGL
Arabidopsis Description
RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPX6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.