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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 7
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020279.1-P Field mustard mitochondrion 100.0 94.55
AT3G46020.1 Thale cress mitochondrion 71.15 72.55
Os01t0502800-01 Rice mitochondrion 32.69 64.15
KRH23034 Soybean mitochondrion 47.12 56.98
KRH10291 Soybean nucleus 37.5 52.7
VIT_06s0004g04260.t01 Wine grape mitochondrion 52.88 51.89
TraesCS4D01G205200.1 Wheat mitochondrion 48.08 48.08
TraesCS4A01G100000.1 Wheat mitochondrion 48.08 48.08
TraesCS4B01G204300.1 Wheat mitochondrion 48.08 47.17
KXG36665 Sorghum mitochondrion 45.19 44.76
GSMUA_Achr6P34250_001 Banana mitochondrion 47.12 44.55
AT5G59860.1 Thale cress nucleus 63.46 42.04
CDX82066 Canola cytosol, nucleus, plastid 30.77 33.33
CDY04982 Canola mitochondrion 42.31 30.14
CDY14089 Canola mitochondrion 42.31 30.14
CDY31170 Canola mitochondrion, nucleus 33.65 26.52
CDY47311 Canola mitochondrion 36.54 26.39
CDY06468 Canola mitochondrion 37.5 26.35
CDY46213 Canola nucleus 30.77 26.23
CDX83260 Canola mitochondrion 33.65 26.12
CDY31588 Canola nucleus 19.23 25.64
CDX74955 Canola plastid 35.58 25.52
CDX91368 Canola plastid 35.58 25.52
CDY08312 Canola mitochondrion 37.5 25.49
CDY47314 Canola mitochondrion 36.54 25.33
CDY53035 Canola mitochondrion 36.54 25.17
CDY19230 Canola mitochondrion 32.69 24.46
CDY41969 Canola cytosol 29.81 24.22
CDY35978 Canola mitochondrion, plastid 31.73 23.08
CDY26743 Canola mitochondrion 32.69 22.97
CDY28003 Canola plastid 31.73 22.92
CDY64931 Canola plastid 32.69 22.22
CDY42466 Canola plastid 32.69 22.22
CDY43035 Canola plastid 32.69 22.22
CDX82164 Canola mitochondrion 30.77 22.07
CDY43820 Canola plastid 32.69 21.66
CDY51614 Canola mitochondrion 27.88 20.0
CDY42616 Canola cytosol 29.81 19.75
CDY12133 Canola cytosol 28.85 18.99
CDX90323 Canola plastid 29.81 18.79
CDX71276 Canola nucleus 30.77 18.6
CDY70933 Canola nucleus 28.85 17.86
CDY15876 Canola nucleus 28.85 17.75
CDY72366 Canola nucleus 28.85 17.54
CDY59763 Canola nucleus 27.88 17.37
CDX71070 Canola mitochondrion 23.08 15.79
CDY65478 Canola endoplasmic reticulum 28.85 14.42
CDY42426 Canola mitochondrion 31.73 13.64
CDY16825 Canola plastid 32.69 12.93
CDX83617 Canola nucleus 27.88 12.5
CDY49123 Canola mitochondrion 31.73 12.41
CDY48990 Canola nucleus 28.85 12.35
CDX73070 Canola mitochondrion 31.73 12.22
CDY13632 Canola nucleus 27.88 12.13
CDY52166 Canola nucleus 27.88 11.93
CDX96526 Canola mitochondrion 31.73 11.87
CDX87197 Canola plastid 32.69 10.33
CDY02175 Canola mitochondrion 32.69 10.03
CDY34132 Canola nucleus 21.15 8.63
CDY19589 Canola plastid 30.77 8.58
CDY11283 Canola nucleus 25.0 8.5
CDY06395 Canola nucleus 31.73 8.29
CDX80910 Canola nucleus 14.42 5.75
Protein Annotations
EnsemblPlants:CDY09244EnsemblPlantsGene:GSBRNA2T00001498001Gene3D:3.30.70.330GO:A0A078F876GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0005488InterPro:IPR000504InterPro:IPR012677InterPro:Nucleotide-bd_a/b_plait_sfInterPro:RBD_domain_sf
InterPro:RRM_domPANTHER:PTHR15241PFAM:PF00076PFscan:PS50102ProteinID:CDY09244ProteinID:CDY09244.1
SMART:SM00360SUPFAM:SSF54928UniParc:UPI0004EE72E3UniProt:A0A078F876MapMan:35.2:
Description
BnaA02g06700DBnaA02g06700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F876]
Coordinates
chrLK031993:-:920420..921498
Molecular Weight (calculated)
11747.9 Da
IEP (calculated)
9.605
GRAVY (calculated)
-0.602
Length
104 amino acids
Sequence
(BLAST)
001: MAKRFTTQLF VSRLSGYTTD QSLRQLFSPF GQIKEARLIK DSQTQRPKGF GFVTFESEDD AQKAMKALDG KIVDGRLIFV EAAKDVEAPT TKLDENTHSH
101: YKTS
Best Arabidopsis Sequence Match ( AT3G46020.1 )
(BLAST)
001: MAKRISAQLF VSRLSAYTTD QSLRQLFSPF GQIKEARLIR DSETQRPKGF GFITFDSEDD ARKALKSLDG KIVDGRLIFV EVAKNAEEVR AGINSNKAED
101: RG
Arabidopsis Description
At3g46020 [Source:UniProtKB/TrEMBL;Acc:Q9LZT1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.