Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23034 | Soybean | mitochondrion | 89.19 | 76.74 |
| Os01t0502800-01 | Rice | mitochondrion | 43.24 | 60.38 |
| VIT_06s0004g04260.t01 | Wine grape | mitochondrion | 64.86 | 45.28 |
| KXG36665 | Sorghum | mitochondrion | 54.05 | 38.1 |
| CDY09244 | Canola | mitochondrion | 52.7 | 37.5 |
| AT3G46020.1 | Thale cress | mitochondrion | 51.35 | 37.25 |
| TraesCS4D01G205200.1 | Wheat | mitochondrion | 51.35 | 36.54 |
| TraesCS4A01G100000.1 | Wheat | mitochondrion | 51.35 | 36.54 |
| TraesCS4B01G204300.1 | Wheat | mitochondrion | 51.35 | 35.85 |
| Bra020279.1-P | Field mustard | mitochondrion | 52.7 | 35.45 |
| GSMUA_Achr6P34250_001 | Banana | mitochondrion | 50.0 | 33.64 |
| KRH27720 | Soybean | endoplasmic reticulum, mitochondrion | 39.19 | 29.9 |
| KRH77758 | Soybean | mitochondrion | 41.89 | 27.43 |
| AT5G59860.1 | Thale cress | nucleus | 52.7 | 24.84 |
| KRH67959 | Soybean | mitochondrion | 40.54 | 23.08 |
| KRH17905 | Soybean | cytosol, mitochondrion, nucleus | 25.68 | 22.89 |
| KRG95817 | Soybean | mitochondrion | 37.84 | 20.14 |
| KRG97345 | Soybean | mitochondrion | 36.49 | 19.15 |
| KRH67547 | Soybean | mitochondrion | 35.14 | 18.7 |
| KRH29453 | Soybean | nucleus | 35.14 | 18.57 |
| KRH50325 | Soybean | vacuole | 33.78 | 17.86 |
| KRH29452 | Soybean | nucleus | 36.49 | 17.31 |
| KRH25927 | Soybean | mitochondrion, plastid | 33.78 | 17.24 |
| KRH24832 | Soybean | endoplasmic reticulum | 31.08 | 16.31 |
| KRH55574 | Soybean | mitochondrion, plastid | 31.08 | 15.86 |
| KRH24829 | Soybean | mitochondrion | 31.08 | 15.75 |
| KRH29454 | Soybean | nucleus | 35.14 | 15.29 |
| KRH31570 | Soybean | mitochondrion | 29.73 | 15.17 |
| KRH09475 | Soybean | plastid | 36.49 | 15.0 |
| KRH29451 | Soybean | nucleus | 33.78 | 14.62 |
| KRH51528 | Soybean | nucleus | 35.14 | 14.29 |
| KRH42209 | Soybean | endoplasmic reticulum | 33.78 | 14.2 |
| KRH60842 | Soybean | mitochondrion | 35.14 | 14.05 |
| KRH58335 | Soybean | nucleus | 33.78 | 12.02 |
| KRH38934 | Soybean | plastid | 24.32 | 11.69 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 32.43 | 9.84 |
| KRH40931 | Soybean | mitochondrion | 29.73 | 9.52 |
| KRH56813 | Soybean | mitochondrion | 35.14 | 9.49 |
| KRH03133 | Soybean | nucleus | 35.14 | 9.45 |
| KRH45033 | Soybean | nucleus, plastid | 31.08 | 9.39 |
| KRG90774 | Soybean | nucleus | 29.73 | 7.89 |
| KRG92035 | Soybean | plastid | 35.14 | 6.67 |
| KRH35987 | Soybean | nucleus | 22.97 | 5.88 |
| KRH54698 | Soybean | plastid | 29.73 | 3.26 |
Protein Annotations
| EntrezGene:100807097 | Gene3D:3.30.70.330 | MapMan:35.2 | EMBL:ACUP02009132 | EnsemblPlantsGene:GLYMA_15G040500 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1MDH7 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH10291 | ProteinID:KRH10291 | ProteinID:KRH10291.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR45502 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI00023D26A4 |
Description
hypothetical protein
Coordinates
chr15:-:3184945..3187672
Molecular Weight (calculated)
8300.3 Da
IEP (calculated)
10.213
GRAVY (calculated)
0.039
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MIMLYTTQEQ LKKLFSPFGL VTQADLALDP ITKRPKGFGF VSFKSEIEAE KALRAMNGRI VSGRLILVEL ANEK
001: MAKRISAQLF VSRLSAYTTD QSLRQLFSPF GQIKEARLIR DSETQRPKGF GFITFDSEDD ARKALKSLDG KIVDGRLIFV EVAKNAEEVR AGINSNKAED
101: RG
101: RG
Arabidopsis Description
At3g46020 [Source:UniProtKB/TrEMBL;Acc:Q9LZT1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.