Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24829 | Soybean | mitochondrion | 54.11 | 85.62 |
| KRH24832 | Soybean | endoplasmic reticulum | 35.93 | 58.87 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 25.11 | 51.33 |
| GSMUA_Achr2P19090_001 | Banana | mitochondrion | 22.51 | 49.06 |
| VIT_05s0094g00380.t01 | Wine grape | mitochondrion | 22.94 | 48.18 |
| TraesCS1A01G405700.1 | Wheat | mitochondrion | 22.94 | 47.75 |
| TraesCS3A01G534200.1 | Wheat | mitochondrion | 21.64 | 45.87 |
| TraesCS3B01G610900.1 | Wheat | mitochondrion | 21.21 | 44.95 |
| TraesCS3D01G539400.1 | Wheat | mitochondrion | 21.21 | 44.95 |
| Os01t0974701-01 | Rice | mitochondrion | 22.51 | 44.83 |
| HORVU3Hr1G116710.1 | Barley | mitochondrion | 23.38 | 44.26 |
| CDY31588 | Canola | nucleus | 14.72 | 43.59 |
| Zm00001d041949_P001 | Maize | mitochondrion | 18.18 | 38.89 |
| EES02151 | Sorghum | mitochondrion, plastid | 23.81 | 37.67 |
| KRH23034 | Soybean | mitochondrion | 12.55 | 33.72 |
| PGSC0003DMT400070114 | Potato | endoplasmic reticulum, extracellular | 21.64 | 33.56 |
| CDX71070 | Canola | mitochondrion | 20.78 | 31.58 |
| KRH10291 | Soybean | nucleus | 9.52 | 29.73 |
| KRH17905 | Soybean | cytosol, mitochondrion, nucleus | 9.96 | 27.71 |
| KRH67959 | Soybean | mitochondrion | 15.58 | 27.69 |
| Bra025674.1-P | Field mustard | mitochondrion | 17.32 | 27.59 |
| KRH29453 | Soybean | nucleus | 15.58 | 25.71 |
| KRH77758 | Soybean | mitochondrion | 12.55 | 25.66 |
| KRH27720 | Soybean | endoplasmic reticulum, mitochondrion | 10.39 | 24.74 |
| KRH67547 | Soybean | mitochondrion | 14.72 | 24.46 |
| KRG95817 | Soybean | mitochondrion | 14.29 | 23.74 |
| KRH29452 | Soybean | nucleus | 16.02 | 23.72 |
| KRG97345 | Soybean | mitochondrion | 14.29 | 23.4 |
| KRH29451 | Soybean | nucleus | 16.88 | 22.81 |
| KRH55574 | Soybean | mitochondrion, plastid | 14.29 | 22.76 |
| KRH29454 | Soybean | nucleus | 16.45 | 22.35 |
| KRH25927 | Soybean | mitochondrion, plastid | 13.85 | 22.07 |
| KRH51528 | Soybean | nucleus | 16.88 | 21.43 |
| KRH60842 | Soybean | mitochondrion | 16.88 | 21.08 |
| KRH42209 | Soybean | endoplasmic reticulum | 15.58 | 20.45 |
| KRH31570 | Soybean | mitochondrion | 12.12 | 19.31 |
| KRH50325 | Soybean | vacuole | 11.69 | 19.29 |
| KRH09475 | Soybean | plastid | 13.85 | 17.78 |
| KRH58335 | Soybean | nucleus | 15.15 | 16.83 |
| Solyc10g081180.1.1 | Tomato | nucleus | 16.02 | 16.82 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 16.45 | 15.57 |
| Bra008020.1-P | Field mustard | endoplasmic reticulum | 13.85 | 15.38 |
| KRH45033 | Soybean | nucleus, plastid | 16.02 | 15.1 |
| Bra008142.1-P | Field mustard | mitochondrion | 15.58 | 13.64 |
| KRH03133 | Soybean | nucleus | 16.02 | 13.45 |
| KRH56813 | Soybean | mitochondrion | 15.58 | 13.14 |
| Bra015926.1-P | Field mustard | mitochondrion | 15.58 | 12.63 |
| KRG92035 | Soybean | plastid | 19.91 | 11.79 |
| KRH38934 | Soybean | plastid | 7.79 | 11.69 |
| KRG90774 | Soybean | nucleus | 13.42 | 11.11 |
| KRH35987 | Soybean | nucleus | 9.52 | 7.61 |
| KRH54698 | Soybean | plastid | 12.99 | 4.45 |
Protein Annotations
| EntrezGene:100802141 | Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A0R0IKN2 | EMBL:ACUP02004739 | EnsemblPlantsGene:GLYMA_08G000100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR000504 | InterPro:IPR012677 | EnsemblPlants:KRH40931 | ProteinID:KRH40931 | ProteinID:KRH40931.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR45502 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | TMHMM:TMhelix | UniParc:UPI0006ED8829 | : | : |
Description
hypothetical protein
Coordinates
chr8:-:8125..11800
Molecular Weight (calculated)
25647.5 Da
IEP (calculated)
9.894
GRAVY (calculated)
0.052
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVKTACCFT PSLRKMLYCV SDINLKFTVM RIASALVNGS ALHFHLPRFL YVRHHSSIKL FVTGLSYDTN EPVLRDAFGQ HGEIIEVKVI CDHVTGKSRG
101: YGFVRFLSET IAAATHKEMN GQILDGRCIR VSYAHKDLGN LSLSAALKLS HCSSDDALDA PVKTLTNGFG SKPAFEPRVL KRTRGSLDRV KKPPTADKAF
201: QDCLKDPFLV GAPKMVFFLT IFKLLINGFG M
101: YGFVRFLSET IAAATHKEMN GQILDGRCIR VSYAHKDLGN LSLSAALKLS HCSSDDALDA PVKTLTNGFG SKPAFEPRVL KRTRGSLDRV KKPPTADKAF
201: QDCLKDPFLV GAPKMVFFLT IFKLLINGFG M
001: MFSSLFVRCN SITSPLRCFA IRGSCSKLFV GGLSYDTNEP VLKNEFEKYG EIIEVKVICD HKSGKSKGYG FVLFDSEEAA ASALASMDNQ LLEGRNIRVE
101: YAQPKRSLYQ NPK
101: YAQPKRSLYQ NPK
Arabidopsis Description
Glycine-rich RNA-binding-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BEY1]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.