Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G534200.1 | Wheat | mitochondrion | 70.27 | 71.56 |
| HORVU3Hr1G116710.1 | Barley | mitochondrion | 69.37 | 63.11 |
| Os01t0974701-01 | Rice | mitochondrion | 61.26 | 58.62 |
| GSMUA_Achr2P19090_001 | Banana | mitochondrion | 55.86 | 58.49 |
| Zm00001d041949_P001 | Maize | mitochondrion | 42.34 | 43.52 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 43.24 | 42.48 |
| EES02151 | Sorghum | mitochondrion, plastid | 54.95 | 41.78 |
| VIT_05s0094g00380.t01 | Wine grape | mitochondrion | 38.74 | 39.09 |
| CDY31588 | Canola | nucleus | 27.03 | 38.46 |
| KRH24829 | Soybean | mitochondrion | 47.75 | 36.3 |
| KRH24832 | Soybean | endoplasmic reticulum | 39.64 | 31.21 |
| CDX71070 | Canola | mitochondrion | 39.64 | 28.95 |
| PGSC0003DMT400070114 | Potato | endoplasmic reticulum, extracellular | 37.84 | 28.19 |
| TraesCS4A01G100000.1 | Wheat | mitochondrion | 25.23 | 26.92 |
| TraesCS2A01G296100.1 | Wheat | mitochondrion | 33.33 | 26.62 |
| Bra025674.1-P | Field mustard | mitochondrion | 30.63 | 23.45 |
| KRH40931 | Soybean | mitochondrion | 47.75 | 22.94 |
| TraesCS4A01G099700.1 | Wheat | plastid | 32.43 | 20.93 |
| TraesCS6A01G216500.1 | Wheat | nucleus | 29.73 | 20.37 |
| TraesCS3A01G418900.1 | Wheat | mitochondrion | 26.13 | 19.86 |
| TraesCS4A01G293000.1 | Wheat | plastid | 28.83 | 19.75 |
| TraesCS3A01G422600.1 | Wheat | nucleus | 30.63 | 19.65 |
| TraesCS5A01G015000.1 | Wheat | nucleus | 28.83 | 18.82 |
| TraesCS2A01G212000.1 | Wheat | mitochondrion | 23.42 | 18.57 |
| TraesCS7A01G307200.1 | Wheat | plastid | 25.23 | 18.3 |
| Bra008020.1-P | Field mustard | endoplasmic reticulum | 29.73 | 15.87 |
| Solyc10g081180.1.1 | Tomato | nucleus | 30.63 | 15.45 |
| TraesCS4A01G355700.1 | Wheat | nucleus | 27.03 | 14.22 |
| Bra008142.1-P | Field mustard | mitochondrion | 33.33 | 14.02 |
| TraesCS3A01G428400.1 | Wheat | mitochondrion | 27.93 | 13.72 |
| TraesCS7A01G326800.1 | Wheat | nucleus | 28.83 | 13.5 |
| Bra015926.1-P | Field mustard | mitochondrion | 32.43 | 12.63 |
| TraesCS5A01G460900.1 | Wheat | mitochondrion | 33.33 | 12.13 |
| TraesCS2A01G237400.1 | Wheat | nucleus | 29.73 | 11.26 |
| TraesCS4A01G288500.1 | Wheat | nucleus | 26.13 | 9.15 |
| TraesCS6A01G292000.1 | Wheat | plastid | 26.13 | 7.47 |
| TraesCS2A01G176700.1 | Wheat | mitochondrion | 34.23 | 5.18 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G405700.1 | EnsemblPlantsGene:TraesCS1A01G405700 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom | PANTHER:PTHR45502 |
| PFAM:PF00076 | PFscan:PS50102 | SMART:SM00360 | SUPFAM:SSF54928 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1A:-:568458927..568460322
Molecular Weight (calculated)
12099.3 Da
IEP (calculated)
7.510
GRAVY (calculated)
-0.218
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSWGGRVAP HTATPIGRLL NLRADFSSCS KLFVGGMSYD TNEIALKDAF SQHGDVVEVK VICHPDPVTG RSKAYGFVKF SSETEAATTL EKMSDEVLDG
101: RSIRVPYANR G
101: RSIRVPYANR G
001: MFSSLFVRCN SITSPLRCFA IRGSCSKLFV GGLSYDTNEP VLKNEFEKYG EIIEVKVICD HKSGKSKGYG FVLFDSEEAA ASALASMDNQ LLEGRNIRVE
101: YAQPKRSLYQ NPK
101: YAQPKRSLYQ NPK
Arabidopsis Description
Glycine-rich RNA-binding-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BEY1]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.