Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G312500.1 | Wheat | mitochondrion | 95.68 | 95.68 |
| TraesCS2D01G294000.1 | Wheat | mitochondrion | 94.96 | 94.96 |
| Os04t0414300-00 | Rice | mitochondrion | 76.26 | 77.37 |
| EES10764 | Sorghum | mitochondrion | 73.38 | 75.56 |
| HORVU2Hr1G073330.9 | Barley | cytosol, nucleus | 71.22 | 72.79 |
| VIT_08s0007g02860.t01 | Wine grape | mitochondrion | 51.08 | 53.38 |
| PGSC0003DMT400072597 | Potato | mitochondrion | 48.92 | 52.71 |
| KRH67959 | Soybean | mitochondrion | 48.92 | 52.31 |
| Solyc10g083240.1.1 | Tomato | mitochondrion | 48.2 | 51.94 |
| GSMUA_Achr6P35640_001 | Banana | nucleus | 48.2 | 48.2 |
| AT5G06210.1 | Thale cress | mitochondrion | 48.92 | 46.58 |
| CDY04982 | Canola | mitochondrion | 48.92 | 46.58 |
| Bra028739.1-P | Field mustard | mitochondrion | 48.92 | 46.58 |
| CDY14089 | Canola | mitochondrion | 47.48 | 45.21 |
| KRH27720 | Soybean | endoplasmic reticulum, mitochondrion | 30.22 | 43.3 |
| KRH77758 | Soybean | mitochondrion | 34.53 | 42.48 |
| VIT_06s0080g00870.t01 | Wine grape | plastid | 33.81 | 42.34 |
| AT2G27330.1 | Thale cress | mitochondrion | 32.37 | 38.79 |
| TraesCS4A01G100000.1 | Wheat | mitochondrion | 26.62 | 35.58 |
| TraesCS1A01G405700.1 | Wheat | mitochondrion | 26.62 | 33.33 |
| TraesCS3A01G534200.1 | Wheat | mitochondrion | 25.9 | 33.03 |
| CDY31170 | Canola | mitochondrion, nucleus | 30.22 | 31.82 |
| Bra000516.1-P | Field mustard | mitochondrion | 29.5 | 30.6 |
| CDX83260 | Canola | mitochondrion | 29.5 | 30.6 |
| TraesCS2A01G212000.1 | Wheat | mitochondrion | 29.5 | 29.29 |
| TraesCS7A01G307200.1 | Wheat | plastid | 30.94 | 28.1 |
| TraesCS4A01G099700.1 | Wheat | plastid | 34.53 | 27.91 |
| TraesCS3A01G418900.1 | Wheat | mitochondrion | 28.06 | 26.71 |
| TraesCS3A01G422600.1 | Wheat | nucleus | 33.09 | 26.59 |
| TraesCS4A01G293000.1 | Wheat | plastid | 27.34 | 23.46 |
| TraesCS5A01G015000.1 | Wheat | nucleus | 28.06 | 22.94 |
| TraesCS6A01G216500.1 | Wheat | nucleus | 25.9 | 22.22 |
| TraesCS3A01G428400.1 | Wheat | mitochondrion | 29.5 | 18.14 |
| TraesCS4A01G355700.1 | Wheat | nucleus | 27.34 | 18.01 |
| TraesCS7A01G326800.1 | Wheat | nucleus | 25.18 | 14.77 |
| TraesCS5A01G460900.1 | Wheat | mitochondrion | 30.94 | 14.1 |
| TraesCS2A01G237400.1 | Wheat | nucleus | 25.18 | 11.95 |
| TraesCS4A01G288500.1 | Wheat | nucleus | 23.74 | 10.41 |
| TraesCS6A01G292000.1 | Wheat | plastid | 27.34 | 9.79 |
| TraesCS2A01G176700.1 | Wheat | mitochondrion | 35.97 | 6.82 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G296100.1 | EnsemblPlantsGene:TraesCS2A01G296100 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom | PANTHER:PTHR45502 |
| PANTHER:PTHR45502:SF1 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 | SUPFAM:SSF54928 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:509577647..509579470
Molecular Weight (calculated)
14953.0 Da
IEP (calculated)
10.895
GRAVY (calculated)
-0.273
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAALREAS RRLASTSTRS PAGATTRPLL LTHSRGITHK LFIGGLSQFA TEDSLAEAFT RYGQVLEATI VTDKMTSRSK GFGFVKFASE EEANKAREEM
101: NSKVLNGRVI YVDIAKAKQG RAADVVPIAR GPPKPVGNT
101: NSKVLNGRVI YVDIAKAKQG RAADVVPIAR GPPKPVGNT
001: MAALARIGGR HLKSVCLINS SASCFFTQRR GVASKLFIGG LSFCTTEQGL SEAFSKCGQV VEAQIVMDRV SDRSKGFGFV TFASADEAQK ALMEFNGQQL
101: NGRTIFVDYA KAKQSLGGGG GYPIARGPPD PAVIAATRTT ETSKSD
101: NGRTIFVDYA KAKQSLGGGG GYPIARGPPD PAVIAATRTT ETSKSD
Arabidopsis Description
S-RBP11Small RNA-binding protein 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FFZ6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.