Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04982 | Canola | mitochondrion | 80.14 | 80.14 |
| CDY14089 | Canola | mitochondrion | 79.45 | 79.45 |
| Bra028739.1-P | Field mustard | mitochondrion | 78.77 | 78.77 |
| VIT_08s0007g02860.t01 | Wine grape | mitochondrion | 59.59 | 65.41 |
| PGSC0003DMT400072597 | Potato | mitochondrion | 57.53 | 65.12 |
| Solyc10g083240.1.1 | Tomato | mitochondrion | 56.85 | 64.34 |
| KRH67959 | Soybean | mitochondrion | 52.74 | 59.23 |
| TraesCS2D01G294000.1 | Wheat | mitochondrion | 47.26 | 49.64 |
| TraesCS2A01G296100.1 | Wheat | mitochondrion | 46.58 | 48.92 |
| TraesCS2B01G312500.1 | Wheat | mitochondrion | 46.58 | 48.92 |
| EES10764 | Sorghum | mitochondrion | 44.52 | 48.15 |
| Os04t0414300-00 | Rice | mitochondrion | 43.84 | 46.72 |
| HORVU2Hr1G073330.9 | Barley | cytosol, nucleus | 41.78 | 44.85 |
| AT4G13860.1 | Thale cress | cytosol | 23.97 | 40.23 |
| AT2G27330.1 | Thale cress | mitochondrion | 30.82 | 38.79 |
| AT3G46020.1 | Thale cress | mitochondrion | 26.03 | 37.25 |
| AT3G23830.1 | Thale cress | mitochondrion, plastid | 31.51 | 33.82 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 23.29 | 30.09 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 34.25 | 29.94 |
| AT3G08000.1 | Thale cress | plastid | 28.77 | 29.37 |
| AT4G13850.1 | Thale cress | mitochondrion | 29.45 | 27.22 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 27.4 | 25.64 |
| AT5G59860.1 | Thale cress | nucleus | 26.71 | 24.84 |
| AT1G18630.1 | Thale cress | mitochondrion | 26.03 | 24.52 |
| AT4G39260.1 | Thale cress | nucleus | 23.97 | 20.71 |
| AT1G73530.1 | Thale cress | plastid | 25.34 | 20.44 |
| AT2G21660.1 | Thale cress | nucleus | 23.29 | 19.32 |
| AT1G74230.1 | Thale cress | mitochondrion, plastid | 35.62 | 17.99 |
| AT3G26420.1 | Thale cress | nucleus | 27.4 | 16.33 |
| AT5G61030.1 | Thale cress | mitochondrion | 30.82 | 14.56 |
| AT3G20930.2 | Thale cress | plastid | 30.14 | 11.61 |
| AT1G60650.2 | Thale cress | nucleus | 21.23 | 10.62 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 21.92 | 10.32 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EntrezGene:830508 | UniProt:A0A178UMQ7 | ProteinID:AED90984.1 | ArrayExpress:AT5G06210 |
| EnsemblPlantsGene:AT5G06210 | RefSeq:AT5G06210 | TAIR:AT5G06210 | RefSeq:AT5G06210-TAIR-G | EnsemblPlants:AT5G06210.1 | TAIR:AT5G06210.1 |
| EMBL:AY062714 | EMBL:AY087577 | EMBL:AY093349 | ProteinID:BAB09686.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 | GO:GO:1901002 |
| InterPro:IPR000504 | InterPro:IPR012677 | RefSeq:NP_196239.1 | InterPro:Nucleotide-bd_a/b_plait_sf | ProteinID:OAO94965.1 | PFAM:PF00076 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50102 | PFscan:PS51257 | PANTHER:PTHR45502 | PANTHER:PTHR45502:SF1 |
| UniProt:Q9FFZ6 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI00000A8830 |
| SEG:seg | : | : | : | : | : |
Description
S-RBP11Small RNA-binding protein 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FFZ6]
Coordinates
chr5:+:1878449..1879875
Molecular Weight (calculated)
15422.4 Da
IEP (calculated)
9.376
GRAVY (calculated)
-0.075
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALARIGGR HLKSVCLINS SASCFFTQRR GVASKLFIGG LSFCTTEQGL SEAFSKCGQV VEAQIVMDRV SDRSKGFGFV TFASADEAQK ALMEFNGQQL
101: NGRTIFVDYA KAKQSLGGGG GYPIARGPPD PAVIAATRTT ETSKSD
101: NGRTIFVDYA KAKQSLGGGG GYPIARGPPD PAVIAATRTT ETSKSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.