Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42426 | Canola | mitochondrion | 74.05 | 88.43 |
| CDX96526 | Canola | mitochondrion | 83.74 | 87.05 |
| CDX73070 | Canola | mitochondrion | 81.31 | 87.04 |
| Bra008142.1-P | Field mustard | mitochondrion | 79.24 | 86.74 |
| CDY49123 | Canola | mitochondrion | 79.24 | 86.09 |
| Bra015926.1-P | Field mustard | mitochondrion | 82.7 | 83.86 |
| CDX82164 | Canola | mitochondrion | 39.1 | 77.93 |
| CDY51614 | Canola | mitochondrion | 36.33 | 72.41 |
| AT4G13850.1 | Thale cress | mitochondrion | 30.45 | 55.7 |
| AT3G23830.1 | Thale cress | mitochondrion, plastid | 24.57 | 52.21 |
| AT1G18630.1 | Thale cress | mitochondrion | 25.95 | 48.39 |
| AT5G61030.1 | Thale cress | mitochondrion | 51.56 | 48.22 |
| Solyc10g081180.1.1 | Tomato | nucleus | 35.99 | 47.27 |
| AT4G39260.1 | Thale cress | nucleus | 27.34 | 46.75 |
| AT2G21660.1 | Thale cress | nucleus | 28.03 | 46.02 |
| AT4G13860.1 | Thale cress | cytosol | 13.84 | 45.98 |
| PGSC0003DMT400072235 | Potato | mitochondrion, nucleus | 39.45 | 43.35 |
| CDY65478 | Canola | endoplasmic reticulum | 29.41 | 40.87 |
| Bra008020.1-P | Field mustard | endoplasmic reticulum | 29.41 | 40.87 |
| AT5G06210.1 | Thale cress | mitochondrion | 17.99 | 35.62 |
| AT3G46020.1 | Thale cress | mitochondrion | 11.42 | 32.35 |
| AT2G27330.1 | Thale cress | mitochondrion | 12.8 | 31.9 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 12.46 | 31.86 |
| AT3G08000.1 | Thale cress | plastid | 15.57 | 31.47 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 13.84 | 25.64 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 13.84 | 23.95 |
| AT3G26420.1 | Thale cress | nucleus | 19.38 | 22.86 |
| AT5G59860.1 | Thale cress | nucleus | 11.07 | 20.38 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 20.07 | 18.71 |
| AT1G73530.1 | Thale cress | plastid | 11.07 | 17.68 |
| AT1G60650.2 | Thale cress | nucleus | 17.65 | 17.47 |
| AT3G20930.2 | Thale cress | plastid | 12.8 | 9.76 |
Protein Annotations
| MapMan:16.12.5.2 | Gene3D:3.30.70.330 | EntrezGene:843763 | ProteinID:AAG52402.1 | ProteinID:AEE35568.1 | ArrayExpress:AT1G74230 |
| EnsemblPlantsGene:AT1G74230 | RefSeq:AT1G74230 | TAIR:AT1G74230 | RefSeq:AT1G74230-TAIR-G | EnsemblPlants:AT1G74230.1 | TAIR:AT1G74230.1 |
| Unigene:At.18152 | EMBL:BT002037 | EMBL:BT006315 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003697 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005507 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | GO:GO:0042803 | GO:GO:0043621 | GO:GO:0080156 | Symbol:GR-RBP5 | InterPro:IPR000504 |
| InterPro:IPR012677 | RefSeq:NP_177563.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR01228 | PFscan:PS50102 | PANTHER:PTHR45502 | UniProt:Q9C909 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI00000AC1D9 | SEG:seg | : |
Description
RBG5Glycine-rich RNA-binding protein 5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C909]
Coordinates
chr1:+:27914602..27917097
Molecular Weight (calculated)
28730.0 Da
IEP (calculated)
4.368
GRAVY (calculated)
-0.595
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLSKVGRL FSQTSSHVTA SSSMLQSIRC MSSSKIFVGG ISYSTDEFGL REAFSKYGEV VDAKIIVDRE TGRSRGFAFV TFTSTEEASN AMQLDGQDLH
101: GRRIRVNYAT ERGSGFGGRG FGGPGGGYGA SDGGYGAPAG GYGGGAGGYG GNSSYSGNAG GGGGYGGNSS YGGNAGGYGG NPPYSGNAVG GGGGYGSNFG
201: GGGGYGVAGG VGGSENFAQG SSTNAGFDDK FESNQPLGND TDHQTESGLG GDEQFGGSDN QFGDAENGNT ENGPVGFDQT DDGDVAKRA
101: GRRIRVNYAT ERGSGFGGRG FGGPGGGYGA SDGGYGAPAG GYGGGAGGYG GNSSYSGNAG GGGGYGGNSS YGGNAGGYGG NPPYSGNAVG GGGGYGSNFG
201: GGGGYGVAGG VGGSENFAQG SSTNAGFDDK FESNQPLGND TDHQTESGLG GDEQFGGSDN QFGDAENGNT ENGPVGFDQT DDGDVAKRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.