Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G13850.1 | Thale cress | mitochondrion | 72.06 | 62.03 |
| PGSC0003DMT400040748 | Potato | mitochondrion | 64.71 | 60.69 |
| Solyc09g092320.2.1 | Tomato | mitochondrion, nucleus | 50.74 | 59.48 |
| Solyc05g053780.2.1 | Tomato | mitochondrion | 68.38 | 57.76 |
| KRG97345 | Soybean | mitochondrion | 56.62 | 54.61 |
| VIT_05s0029g00440.t01 | Wine grape | mitochondrion, nucleus, plastid | 61.03 | 54.61 |
| GSMUA_Achr7P02750_001 | Banana | mitochondrion | 58.82 | 53.33 |
| PGSC0003DMT400053017 | Potato | mitochondrion, plastid | 58.82 | 52.63 |
| GSMUA_Achr4P16080_001 | Banana | mitochondrion | 61.03 | 43.68 |
| KRH31570 | Soybean | mitochondrion | 46.32 | 43.45 |
| AT4G13860.1 | Thale cress | cytosol | 27.21 | 42.53 |
| AT3G46020.1 | Thale cress | mitochondrion | 28.68 | 38.24 |
| AT1G18630.1 | Thale cress | mitochondrion | 43.38 | 38.06 |
| AT3G08000.1 | Thale cress | plastid | 37.5 | 35.66 |
| AT4G39260.1 | Thale cress | nucleus | 41.18 | 33.14 |
| AT5G06210.1 | Thale cress | mitochondrion | 33.82 | 31.51 |
| AT2G21660.1 | Thale cress | nucleus | 40.44 | 31.25 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 25.74 | 30.97 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 34.56 | 28.14 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 30.15 | 26.28 |
| AT2G27330.1 | Thale cress | mitochondrion | 21.32 | 25.0 |
| AT1G74230.1 | Thale cress | mitochondrion, plastid | 52.21 | 24.57 |
| AT5G59860.1 | Thale cress | nucleus | 27.94 | 24.2 |
| AT5G61030.1 | Thale cress | mitochondrion | 48.53 | 21.36 |
| AT1G73530.1 | Thale cress | plastid | 25.0 | 18.78 |
| AT3G26420.1 | Thale cress | nucleus | 31.62 | 17.55 |
| AT1G60650.2 | Thale cress | nucleus | 28.68 | 13.36 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 30.15 | 13.23 |
| AT3G20930.2 | Thale cress | plastid | 27.94 | 10.03 |
Protein Annotations
| MapMan:16.12.5.2 | MapMan:16.7.2 | Gene3D:3.30.70.330 | EntrezGene:821966 | UniProt:A0A178VD35 | ProteinID:AEE76819.1 |
| ProteinID:AEE76820.1 | ArrayExpress:AT3G23830 | EnsemblPlantsGene:AT3G23830 | RefSeq:AT3G23830 | TAIR:AT3G23830 | RefSeq:AT3G23830-TAIR-G |
| EnsemblPlants:AT3G23830.1 | TAIR:AT3G23830.1 | EMBL:AY070755 | EMBL:AY085838 | EMBL:AY097374 | ProteinID:BAB03001.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003690 | GO:GO:0003697 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006139 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009409 |
| GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:1900864 | Symbol:GR-RBP4 |
| InterPro:IPR000504 | InterPro:IPR012677 | RefSeq:NP_189025.1 | RefSeq:NP_850629.1 | InterPro:Nucleotide-bd_a/b_plait_sf | ProteinID:OAP03285.1 |
| PFAM:PF00076 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50102 | PANTHER:PTHR44202 | UniProt:Q9LIS2 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI00000AB4FB | SEG:seg |
Description
RBG4GRP4 [Source:UniProtKB/TrEMBL;Acc:A0A178VD35]
Coordinates
chr3:-:8606429..8608297
Molecular Weight (calculated)
14129.5 Da
IEP (calculated)
8.730
GRAVY (calculated)
-0.330
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFCNKLSGI LRQGVSQSSN GPVTSMLGSL RYMSSKLFVG GLSWGTDDSS LKQAFTSFGE VTEATVIADR ETGRSRGFGF VSFSCEDSAN NAIKEMDGKE
101: LNGRQIRVNL ATERSSAPRS SFGGGGGYGG GGGGGY
101: LNGRQIRVNL ATERSSAPRS SFGGGGGYGG GGGGGY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.