Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42466 | Canola | plastid | 89.1 | 90.85 |
| Bra029020.1-P | Field mustard | plastid | 88.46 | 90.2 |
| CDY43035 | Canola | plastid | 88.46 | 90.2 |
| CDY64931 | Canola | plastid | 87.82 | 89.54 |
| Bra002976.1-P | Field mustard | mitochondrion | 59.62 | 89.42 |
| CDY43820 | Canola | plastid | 89.1 | 88.53 |
| KRH55574 | Soybean | mitochondrion, plastid | 61.54 | 66.21 |
| KRH25927 | Soybean | mitochondrion, plastid | 59.62 | 64.14 |
| PGSC0003DMT400049607 | Potato | plastid | 60.9 | 60.51 |
| Solyc07g063900.2.1 | Tomato | plastid | 58.33 | 60.26 |
| EES14515 | Sorghum | plastid | 53.85 | 60.0 |
| Zm00001d024675_P001 | Maize | mitochondrion | 53.21 | 59.29 |
| GSMUA_Achr11P... | Banana | mitochondrion | 41.03 | 59.26 |
| GSMUA_Achr8P07380_001 | Banana | mitochondrion | 51.28 | 59.26 |
| GSMUA_Achr5P26410_001 | Banana | cytosol, mitochondrion, nucleus | 42.95 | 58.26 |
| Os08t0139000-02 | Rice | mitochondrion | 51.92 | 57.45 |
| TraesCS7B01G207500.1 | Wheat | mitochondrion | 53.21 | 54.61 |
| TraesCS7A01G307200.1 | Wheat | plastid | 51.92 | 52.94 |
| VIT_08s0007g00070.t01 | Wine grape | mitochondrion | 42.31 | 49.62 |
| AT4G13860.1 | Thale cress | cytosol | 21.79 | 39.08 |
| AT2G37510.2 | Thale cress | mitochondrion, plastid | 40.38 | 37.72 |
| AT3G46020.1 | Thale cress | mitochondrion | 21.15 | 32.35 |
| AT3G23830.1 | Thale cress | mitochondrion, plastid | 26.28 | 30.15 |
| AT5G59865.1 | Thale cress | mitochondrion, plastid | 21.15 | 29.2 |
| AT1G73530.1 | Thale cress | plastid | 32.69 | 28.18 |
| AT5G06210.1 | Thale cress | mitochondrion | 25.64 | 27.4 |
| AT4G13850.1 | Thale cress | mitochondrion | 27.56 | 27.22 |
| AT2G27330.1 | Thale cress | mitochondrion | 19.87 | 26.72 |
| AT1G18630.1 | Thale cress | mitochondrion | 25.64 | 25.81 |
| AT3G08000.1 | Thale cress | plastid | 21.15 | 23.08 |
| AT4G39260.1 | Thale cress | nucleus | 23.72 | 21.89 |
| AT2G21660.1 | Thale cress | nucleus | 23.72 | 21.02 |
| AT5G59860.1 | Thale cress | nucleus | 19.23 | 19.11 |
| AT1G74230.1 | Thale cress | mitochondrion, plastid | 25.64 | 13.84 |
| AT3G26420.1 | Thale cress | nucleus | 21.15 | 13.47 |
| AT5G61030.1 | Thale cress | mitochondrion | 25.0 | 12.62 |
| AT3G20930.2 | Thale cress | plastid | 26.28 | 10.82 |
| AT5G04280.1 | Thale cress | cytosol, nucleus, plastid | 18.59 | 9.35 |
| AT1G60650.2 | Thale cress | nucleus | 16.03 | 8.56 |
Protein Annotations
| MapMan:16.12.5.2 | Gene3D:3.30.70.330 | EntrezGene:835546 | UniProt:A0A178UJY3 | ProteinID:AED96512.1 | ArrayExpress:AT5G54580 |
| EnsemblPlantsGene:AT5G54580 | RefSeq:AT5G54580 | TAIR:AT5G54580 | RefSeq:AT5G54580-TAIR-G | EnsemblPlants:AT5G54580.1 | TAIR:AT5G54580.1 |
| EMBL:AY072101 | EMBL:AY085234 | EMBL:AY096589 | Unigene:At.20805 | ProteinID:BAB09337.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0080156 | InterPro:IPR000504 | InterPro:IPR012677 | RefSeq:NP_200269.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | ProteinID:OAO93352.1 | PFAM:PF00076 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50102 | PANTHER:PTHR45392 |
| UniProt:Q9FIU6 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI00000A5AF3 |
Description
ORRM2Organelle RRM domain-containing protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FIU6]
Coordinates
chr5:+:22171166..22173019
Molecular Weight (calculated)
17091.2 Da
IEP (calculated)
10.132
GRAVY (calculated)
-0.374
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAMRLPAI SRAVTEVASA PVGLRRLFCS NASRFSFLSP QAESQTPARP QAEPSTNLFV SGLSKRTTSE GLRTAFAQFG EVADAKVVTD RVSGYSKGFG
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.