Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G54580.1 | KRH41057 | AT2G33550.1 | 21798944 |
| AT5G54580.1 | KRH59736 | AT2G33550.1 | 21798944 |
| AT5G54580.1 | KRH44644 | AT3G21215.1 | 21798944 |
| AT5G54580.1 | KRH47009 | AT3G21215.1 | 21798944 |
| AT5G54580.1 | KRH16959 | AT3G49580.1 | 21798944 |
| AT5G54580.1 | KRH53667 | AT3G49580.1 | 21798944 |
| AT5G54580.1 | KRH64261 | AT3G49580.1 | 21798944 |
| AT5G54580.1 | KRH53532 | AT5G53060.1 | 21798944 |
| AT5G54580.1 | KRH64403 | AT5G53060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25927 | Soybean | mitochondrion, plastid | 92.41 | 92.41 |
| Bra002976.1-P | Field mustard | mitochondrion | 46.21 | 64.42 |
| Solyc07g063900.2.1 | Tomato | plastid | 64.83 | 62.25 |
| EES14515 | Sorghum | plastid | 60.0 | 62.14 |
| GSMUA_Achr11P... | Banana | mitochondrion | 46.21 | 62.04 |
| AT5G54580.1 | Thale cress | mitochondrion, plastid | 66.21 | 61.54 |
| Os08t0139000-02 | Rice | mitochondrion | 59.31 | 60.99 |
| Bra029020.1-P | Field mustard | plastid | 64.14 | 60.78 |
| CDY43035 | Canola | plastid | 64.14 | 60.78 |
| Zm00001d024675_P001 | Maize | mitochondrion | 58.62 | 60.71 |
| PGSC0003DMT400049607 | Potato | plastid | 65.52 | 60.51 |
| CDY64931 | Canola | plastid | 63.45 | 60.13 |
| CDY42466 | Canola | plastid | 63.45 | 60.13 |
| GSMUA_Achr5P26410_001 | Banana | cytosol, mitochondrion, nucleus | 47.59 | 60.0 |
| CDY43820 | Canola | plastid | 63.45 | 58.6 |
| GSMUA_Achr8P07380_001 | Banana | mitochondrion | 53.1 | 57.04 |
| TraesCS7B01G207500.1 | Wheat | mitochondrion | 59.31 | 56.58 |
| VIT_08s0007g00070.t01 | Wine grape | mitochondrion | 51.72 | 56.39 |
| TraesCS7A01G307200.1 | Wheat | plastid | 57.93 | 54.9 |
| KRH67547 | Soybean | mitochondrion | 41.38 | 43.17 |
| KRG95817 | Soybean | mitochondrion | 40.69 | 42.45 |
| KRH67959 | Soybean | mitochondrion | 33.1 | 36.92 |
| KRH23034 | Soybean | mitochondrion | 20.0 | 33.72 |
| KRH10291 | Soybean | nucleus | 15.86 | 31.08 |
| KRH27720 | Soybean | endoplasmic reticulum, mitochondrion | 20.69 | 30.93 |
| KRH77758 | Soybean | mitochondrion | 23.45 | 30.09 |
| KRG97345 | Soybean | mitochondrion | 28.28 | 29.08 |
| KRH09475 | Soybean | plastid | 35.17 | 28.33 |
| KRH17905 | Soybean | cytosol, mitochondrion, nucleus | 15.86 | 27.71 |
| KRH38934 | Soybean | plastid | 28.28 | 26.62 |
| KRH31570 | Soybean | mitochondrion | 25.52 | 25.52 |
| KRH50325 | Soybean | vacuole | 23.45 | 24.29 |
| KRH29453 | Soybean | nucleus | 22.07 | 22.86 |
| KRH24832 | Soybean | endoplasmic reticulum | 22.07 | 22.7 |
| KRH24829 | Soybean | mitochondrion | 22.07 | 21.92 |
| KRH29452 | Soybean | nucleus | 22.76 | 21.15 |
| KRH51528 | Soybean | nucleus | 24.83 | 19.78 |
| KRH29451 | Soybean | nucleus | 22.76 | 19.3 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 31.72 | 18.85 |
| KRH29454 | Soybean | nucleus | 22.07 | 18.82 |
| KRH42209 | Soybean | endoplasmic reticulum | 22.76 | 18.75 |
| KRH45033 | Soybean | nucleus, plastid | 31.03 | 18.37 |
| KRH60842 | Soybean | mitochondrion | 22.76 | 17.84 |
| KRH58335 | Soybean | nucleus | 22.76 | 15.87 |
| KRH56813 | Soybean | mitochondrion | 28.28 | 14.96 |
| KRH03133 | Soybean | nucleus | 28.28 | 14.91 |
| KRH40931 | Soybean | mitochondrion | 22.76 | 14.29 |
| KRG92035 | Soybean | plastid | 28.97 | 10.77 |
| KRG90774 | Soybean | nucleus | 17.93 | 9.32 |
| KRH35987 | Soybean | nucleus | 13.1 | 6.57 |
| KRH54698 | Soybean | plastid | 22.76 | 4.9 |
Protein Annotations
| EntrezGene:100784609 | MapMan:16.12.5.2 | Gene3D:3.30.70.330 | EMBL:ACUP02004025 | EnsemblPlantsGene:GLYMA_06G263200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1KED0 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH55574 | ProteinID:KRH55574 | ProteinID:KRH55574.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR45392 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0001BA6634 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:45053170..45055888
Molecular Weight (calculated)
15804.6 Da
IEP (calculated)
10.365
GRAVY (calculated)
-0.379
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MATRAAVAAP RVLRRFFCTN SASSSFPFVS TLPPGATPAP TRPTAEPNTN LFVSGLSKRT NTERLREEFA KFGEVVHARV VTDRVSGYSK GFGFVQYATI
101: EDAAKGIEGM DGKFLDGWVI FAEYARPRPP PGQPLNSNSS QYGRQ
101: EDAAKGIEGM DGKFLDGWVI FAEYARPRPP PGQPLNSNSS QYGRQ
001: MAMAMRLPAI SRAVTEVASA PVGLRRLFCS NASRFSFLSP QAESQTPARP QAEPSTNLFV SGLSKRTTSE GLRTAFAQFG EVADAKVVTD RVSGYSKGFG
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
101: FVRYATLEDS AKGIAGMDGK FLDGWVIFAE YARPREQSQS YQPQNNMSRP PYYGNR
Arabidopsis Description
ORRM2Organelle RRM domain-containing protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FIU6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.