CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67547	Soybean	mitochondrion	92.81	92.81
VIT_08s0040g03330.t01	Wine grape	plastid	74.1	73.57
Solyc10g084630.1.1	Tomato	mitochondrion	66.19	66.67
Bra005189.1-P	Field mustard	plastid	64.03	61.81
PGSC0003DMT400028726	Potato	nucleus	64.75	61.64
CDX74955	Canola	plastid	63.31	60.69
CDX91368	Canola	plastid	63.31	60.69
AT2G37510.2	Thale cress	mitochondrion, plastid	67.63	56.29
TraesCS4B01G204600.1	Wheat	plastid	67.63	54.97
TraesCS4D01G205500.1	Wheat	plastid	67.63	54.65
Os03t0278800-00	Rice	plastid	67.63	54.34
TraesCS4A01G099700.1	Wheat	plastid	66.91	54.07
EER92461	Sorghum	plastid	65.47	53.85
Zm00001d028661_P001	Maize	plastid	64.03	53.61
GSMUA_Achr6P15340_001	Banana	plastid	67.63	53.41
HORVU4Hr1G059000.4	Barley	plastid	66.91	48.19
KRH25927	Soybean	mitochondrion, plastid	43.88	42.07
KRH23034	Soybean	mitochondrion	25.9	41.86
KRH67959	Soybean	mitochondrion	38.13	40.77
KRH55574	Soybean	mitochondrion, plastid	42.45	40.69
KRH77758	Soybean	mitochondrion	31.65	38.94
KRH27720	Soybean	endoplasmic reticulum, mitochondrion	26.62	38.14
KRH10291	Soybean	nucleus	20.14	37.84
KRH09475	Soybean	plastid	39.57	30.56
KRG97345	Soybean	mitochondrion	30.94	30.5
KRH29453	Soybean	nucleus	28.78	28.57
KRH31570	Soybean	mitochondrion	28.78	27.59
KRH38934	Soybean	plastid	28.06	25.32
KRH29452	Soybean	nucleus	28.06	25.0
KRH24832	Soybean	endoplasmic reticulum	25.18	24.82
KRH17905	Soybean	cytosol, mitochondrion, nucleus	14.39	24.1
KRH29451	Soybean	nucleus	29.5	23.98
KRH50325	Soybean	vacuole	23.74	23.57
KRH42209	Soybean	endoplasmic reticulum	29.5	23.3
KRH51528	Soybean	nucleus	30.22	23.08
KRH29454	Soybean	nucleus	28.06	22.94
KRH60842	Soybean	mitochondrion	29.5	22.16
KRH24829	Soybean	mitochondrion	23.02	21.92
KRH58335	Soybean	nucleus	30.22	20.19
KRH01278	Soybean	mitochondrion, nucleus, plastid	30.94	17.62
KRH45033	Soybean	nucleus, plastid	30.22	17.14
KRH56813	Soybean	mitochondrion	30.22	15.33
KRH03133	Soybean	nucleus	30.22	15.27
KRH40931	Soybean	mitochondrion	23.74	14.29
KRG92035	Soybean	plastid	35.25	12.56
KRG90774	Soybean	nucleus	21.58	10.75
KRH35987	Soybean	nucleus	16.55	7.96
KRH54698	Soybean	plastid	29.5	6.08

Protein Annotations

Gene3D:3.30.70.330	MapMan:35.1	EMBL:ACUP02012138	EnsemblPlantsGene:GLYMA_19G173200	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	UniProt:I1NA00	InterPro:IPR000504	InterPro:IPR012677	EnsemblPlants:KRG95817
ProteinID:KRG95817	ProteinID:KRG95817.1	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFscan:PS50102	PANTHER:PTHR45392
InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI00023DD616	SEG:seg

Description

hypothetical protein

Coordinates

chr19:+:43369982..43372774

Molecular Weight (calculated)

15442.6 Da

IEP (calculated)

10.220

GRAVY (calculated)

-0.287

Length

139 amino acids

Sequence
(BLAST)

001: MAFMSGVQRL LRRTPLVHSH YASIRLSSTL TSPKLFVSGL CRLTTDEKLK EAFSSFGQLV EAKVIIDRAS GRSKGFAFVT YTTIEEAEKA REGMNAKFLD
101: GWVIFVDPAK PREPRPPQQS QSQPSETGFT VNKTVGWCG

Best Arabidopsis Sequence Match ( AT2G37510.1 )
(BLAST)

001: MAFVSSFRRL VAGSSSLLSS PSLCVRRCST LTSPRLFVSG LSRLTTNEKL QDAFASFGQL VDARVITDRD SGRSKGFGFV TYATIEDAEK AKAEMNAKFL
101: DGWVIFVDPA RPREPRRPLQ QEPLRPSSES GFTTNKTIGW CK

Arabidopsis Description

RNA-binding (RRM/RBD/RNP motifs) family protein [Source:TAIR;Acc:AT2G37510]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.