CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10291	Soybean	nucleus	76.74	89.19
Os01t0502800-01	Rice	mitochondrion	38.37	62.26
VIT_06s0004g04260.t01	Wine grape	mitochondrion	61.63	50.0
CDY09244	Canola	mitochondrion	56.98	47.12
AT3G46020.1	Thale cress	mitochondrion	54.65	46.08
KXG36665	Sorghum	mitochondrion	55.81	45.71
TraesCS4D01G205200.1	Wheat	mitochondrion	54.65	45.19
TraesCS4A01G100000.1	Wheat	mitochondrion	54.65	45.19
Bra020279.1-P	Field mustard	mitochondrion	56.98	44.55
TraesCS4B01G204300.1	Wheat	mitochondrion	54.65	44.34
GSMUA_Achr6P34250_001	Banana	mitochondrion	50.0	39.09
KRH77758	Soybean	mitochondrion	43.02	32.74
KRH27720	Soybean	endoplasmic reticulum, mitochondrion	36.05	31.96
KRH67959	Soybean	mitochondrion	46.51	30.77
AT5G59860.1	Thale cress	nucleus	54.65	29.94
KRG95817	Soybean	mitochondrion	41.86	25.9
KRH67547	Soybean	mitochondrion	40.7	25.18
KRG97345	Soybean	mitochondrion	38.37	23.4
KRH17905	Soybean	cytosol, mitochondrion, nucleus	22.09	22.89
KRH25927	Soybean	mitochondrion, plastid	36.05	21.38
KRH24832	Soybean	endoplasmic reticulum	34.88	21.28
KRH29453	Soybean	nucleus	33.72	20.71
KRH09475	Soybean	plastid	43.02	20.56
KRH24829	Soybean	mitochondrion	34.88	20.55
KRH50325	Soybean	vacuole	32.56	20.0
KRH55574	Soybean	mitochondrion, plastid	33.72	20.0
KRH29452	Soybean	nucleus	34.88	19.23
KRH31570	Soybean	mitochondrion	31.4	18.62
KRH29454	Soybean	nucleus	33.72	17.06
KRH29451	Soybean	nucleus	32.56	16.37
KRH51528	Soybean	nucleus	33.72	15.93
KRH60842	Soybean	mitochondrion	33.72	15.68
KRH42209	Soybean	endoplasmic reticulum	31.4	15.34
KRH38934	Soybean	plastid	25.58	14.29
KRH58335	Soybean	nucleus	31.4	12.98
KRH40931	Soybean	mitochondrion	33.72	12.55
KRH01278	Soybean	mitochondrion, nucleus, plastid	33.72	11.89
KRH56813	Soybean	mitochondrion	37.21	11.68
KRH03133	Soybean	nucleus	37.21	11.64
KRH45033	Soybean	nucleus, plastid	32.56	11.43
KRG90774	Soybean	nucleus	32.56	10.04
KRG92035	Soybean	plastid	39.53	8.72
KRH35987	Soybean	nucleus	22.09	6.57
KRH54698	Soybean	plastid	29.07	3.71

Protein Annotations

EntrezGene:100781760	Gene3D:3.30.70.330	MapMan:35.2	EMBL:ACUP02008452	EnsemblPlantsGene:GLYMA_13G333700	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	UniProt:I1M4U1	InterPro:IPR000504	InterPro:IPR012677
EnsemblPlants:KRH23034	ProteinID:KRH23034	ProteinID:KRH23034.1	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFscan:PS50102
PANTHER:PTHR45502	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI000233ADF8

Description

hypothetical protein

Coordinates

chr13:+:42766642..42769382

Molecular Weight (calculated)

9686.9 Da

IEP (calculated)

10.548

GRAVY (calculated)

-0.192

Length

86 amino acids

Sequence
(BLAST)

1: MSQRIGTKLF VHRLSFYTTQ EQLKKLFSPF GLVTQADLAL DPITKRPKGF GFVSFKSEIE AEKACKAMNG RIVNGRLILV EPANEK

Best Arabidopsis Sequence Match ( AT3G46020.1 )
(BLAST)

001: MAKRISAQLF VSRLSAYTTD QSLRQLFSPF GQIKEARLIR DSETQRPKGF GFITFDSEDD ARKALKSLDG KIVDGRLIFV EVAKNAEEVR AGINSNKAED
101: RG

Arabidopsis Description

At3g46020 [Source:UniProtKB/TrEMBL;Acc:Q9LZT1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.