CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01278	Soybean	mitochondrion, nucleus, plastid	91.84	92.21
KRG97345	Soybean	mitochondrion	27.35	47.52
TraesCS3D01G424100.1	Wheat	mitochondrion	40.82	45.66
TraesCS3A01G428400.1	Wheat	mitochondrion	42.04	45.58
Os12t0502200-01	Rice	mitochondrion	46.94	44.57
GSMUA_Achr4P03230_001	Banana	mitochondrion	46.12	44.14
TraesCS3B01G465800.1	Wheat	mitochondrion	40.82	43.29
GSMUA_Achr9P07090_001	Banana	mitochondrion	42.04	43.28
KRH29453	Soybean	nucleus	24.49	42.86
EES16016	Sorghum	mitochondrion	43.67	42.8
PGSC0003DMT400064758	Potato	mitochondrion	43.27	42.23
KRH29454	Soybean	nucleus	28.16	40.59
KRH56813	Soybean	mitochondrion	45.31	40.51
KRH29452	Soybean	nucleus	25.71	40.38
KRH03133	Soybean	nucleus	45.31	40.36
Solyc02g066930.2.1	Tomato	nucleus	35.51	40.28
KRH31570	Soybean	mitochondrion	23.67	40.0
KRH29451	Soybean	nucleus	27.76	39.77
Zm00001d041750_P001	Maize	mitochondrion	42.04	39.46
KRH51528	Soybean	nucleus	28.98	39.01
Zm00001d023734_P003	Maize	nucleus, plastid	44.9	38.33
KRH60842	Soybean	mitochondrion	28.16	37.3
HORVU3Hr1G094330.2	Barley	mitochondrion	43.67	34.97
HORVU5Hr1G110370.1	Barley	mitochondrion	41.63	34.81
KRH67959	Soybean	mitochondrion	18.37	34.62
PGSC0003DMT400003685	Potato	nucleus	40.82	33.0
Os10t0321700-01	Rice	mitochondrion	42.45	32.81
TraesCS5A01G460900.1	Wheat	mitochondrion	40.82	32.79
TraesCS5D01G473100.1	Wheat	mitochondrion	40.82	32.68
TraesCS5B01G470700.1	Wheat	mitochondrion	40.82	32.57
KRH23034	Soybean	mitochondrion	11.43	32.56
Os07t0602600-01	Rice	mitochondrion	31.43	32.35
KRH27720	Soybean	endoplasmic reticulum, mitochondrion	12.65	31.96
Solyc02g088790.2.1	Tomato	extracellular, plastid	47.35	31.1
KRH10291	Soybean	nucleus	9.39	31.08
KRH55574	Soybean	mitochondrion, plastid	18.37	31.03
KRH77758	Soybean	mitochondrion	14.29	30.97
KRH67547	Soybean	mitochondrion	17.55	30.94
TraesCS2B01G203200.1	Wheat	mitochondrion	39.59	30.41
KRG95817	Soybean	mitochondrion	17.14	30.22
KRH17905	Soybean	cytosol, mitochondrion, nucleus	10.2	30.12
KRH25927	Soybean	mitochondrion, plastid	17.55	29.66
TraesCS2D01G184200.1	Wheat	mitochondrion	39.18	29.54
KXG36643	Sorghum	mitochondrion	36.73	28.48
Zm00001d022065_P001	Maize	mitochondrion	35.51	28.25
KRH50325	Soybean	vacuole	15.92	27.86
KRH24829	Soybean	mitochondrion	15.92	26.71
KRH42209	Soybean	endoplasmic reticulum	17.96	25.0
KRH24832	Soybean	endoplasmic reticulum	13.88	24.11
KRH09475	Soybean	plastid	17.14	23.33
KRH58335	Soybean	nucleus	19.18	22.6
KRH38934	Soybean	plastid	12.65	20.13
KRG90774	Soybean	nucleus	22.45	19.71
KRH35987	Soybean	nucleus	19.18	16.26
KRH40931	Soybean	mitochondrion	15.1	16.02
KRH54698	Soybean	plastid	38.78	14.1
TraesCS2A01G176700.1	Wheat	mitochondrion	38.37	12.82
KRG92035	Soybean	plastid	15.51	9.74

Protein Annotations

EntrezGene:100818300	MapMan:16.12.5.2	Gene3D:3.30.70.330	EMBL:ACUP02004984	EnsemblPlantsGene:GLYMA_08G245200	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	UniProt:I1KWE5	InterPro:IPR000504	InterPro:IPR012677
EnsemblPlants:KRH45033	ProteinID:KRH45033	ProteinID:KRH45033.1	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00076	PFscan:PS50102
PANTHER:PTHR15241	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI0002337E0A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:21179102..21182406

Molecular Weight (calculated)

26192.3 Da

IEP (calculated)

4.456

GRAVY (calculated)

-0.795

Length

245 amino acids

Sequence
(BLAST)

001: MAFLNKIGNL VKNSAVKHIN QDFSVSTPSL FQAIRSMSSA KLFVGGISYS TDDMSLRESF ARYGEVIDVK VIMDRETGRS RGFGFITFAT SEDASSAIQG
101: MDGQDLHGRR IRVNYATERS RPGFGGDGGY RGSGGSDGYN RGGNYGGGYN SGSDGYNRGG NYGSGNYNVT SSYSDGNAET SYTSGANAGN YQFNENSGGV
201: FGSASGEFSS NQNDATGADN DEFIEPLEDN VRENNDEPTD YAQNR

Best Arabidopsis Sequence Match ( AT5G61030.2 )
(BLAST)

001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA

Arabidopsis Description

RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.