Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G428400.1 | Wheat | mitochondrion | 68.3 | 92.48 |
| TraesCS3D01G424100.1 | Wheat | mitochondrion | 66.01 | 92.24 |
| TraesCS3B01G465800.1 | Wheat | mitochondrion | 68.95 | 91.34 |
| EES16016 | Sorghum | mitochondrion | 53.27 | 65.2 |
| Os12t0502200-01 | Rice | mitochondrion | 54.25 | 64.34 |
| Zm00001d041750_P001 | Maize | mitochondrion | 52.94 | 62.07 |
| Zm00001d023734_P003 | Maize | nucleus, plastid | 55.56 | 59.23 |
| GSMUA_Achr9P07090_001 | Banana | mitochondrion | 40.52 | 52.1 |
| HORVU3Hr1G093400.1 | Barley | plastid | 26.8 | 48.81 |
| GSMUA_Achr4P03230_001 | Banana | mitochondrion | 39.22 | 46.88 |
| Solyc02g066930.2.1 | Tomato | nucleus | 32.35 | 45.83 |
| PGSC0003DMT400064758 | Potato | mitochondrion | 37.25 | 45.42 |
| VIT_17s0000g07330.t01 | Wine grape | plastid | 40.85 | 45.13 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 35.95 | 45.08 |
| HORVU6Hr1G055440.1 | Barley | nucleus | 23.86 | 45.06 |
| KRH45033 | Soybean | nucleus, plastid | 34.97 | 43.67 |
| Bra035944.1-P | Field mustard | plastid | 36.6 | 42.59 |
| CDY16825 | Canola | plastid | 36.27 | 42.21 |
| KRH03133 | Soybean | nucleus | 37.91 | 42.18 |
| Bra012986.1-P | Field mustard | mitochondrion | 41.83 | 41.97 |
| KRH56813 | Soybean | mitochondrion | 37.25 | 41.61 |
| AT5G61030.1 | Thale cress | mitochondrion | 41.5 | 41.1 |
| HORVU5Hr1G110370.1 | Barley | mitochondrion | 37.58 | 39.25 |
| CDY02175 | Canola | mitochondrion | 42.81 | 38.64 |
| HORVU5Hr1G089190.1 | Barley | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 12.42 | 38.38 |
| HORVU5Hr1G002150.1 | Barley | nucleus | 21.57 | 38.15 |
| CDX87197 | Canola | plastid | 38.24 | 35.56 |
| PGSC0003DMT400003685 | Potato | nucleus | 32.68 | 33.0 |
| Solyc02g088790.2.1 | Tomato | extracellular, plastid | 38.24 | 31.37 |
| HORVU2Hr1G073330.9 | Barley | cytosol, nucleus | 13.07 | 29.41 |
| HORVU3Hr1G116710.1 | Barley | mitochondrion | 11.44 | 28.69 |
| HORVU2Hr1G042560.2 | Barley | mitochondrion | 14.05 | 25.9 |
| HORVU7Hr1G078140.5 | Barley | nucleus | 17.97 | 23.91 |
| HORVU4Hr1G059000.4 | Barley | plastid | 14.38 | 22.8 |
| HORVU5Hr1G118010.1 | Barley | mitochondrion, nucleus | 18.3 | 17.95 |
| KRH54698 | Soybean | plastid | 34.97 | 15.88 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G094330.2 | EnsemblPlantsGene:HORVU3Hr1G094330 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| PANTHER:PTHR44212 | PANTHER:PTHR44212:SF3 | PFAM:PF00076 | PFscan:PS50102 | PRINTS:PR01228 | SEG:seg |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000B488303 | UniProt:A0A287MCY0 | MapMan:16.12.5.2 | : |
Description
No Description!
Coordinates
chrchr3H:+:645653349..645656591
Molecular Weight (calculated)
31118.6 Da
IEP (calculated)
9.365
GRAVY (calculated)
-0.638
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: HRLGAKGRRD APARSYTRRR LQDPLPLAAA RNSTTPRRLL RFSLHRSRQQ IGTMALANKL GGLLKKATSS NPTLYQAIRC MSSSKLFVGG LSYTTDEGSL
101: RDAFSHYGEI IDAKIIVDRD TGRSRGFGFI TYAAEEQASS AIMALDGKDL HGRNLRVSAA TERTSGFRND GGRGFGGGGY GGGSYGGGGY GGNSGGGGGG
201: GGYGGGGYGG NSGDGGGYAP SAGTDAFSGG NFAPAGGDNF AAGNFGSDSG FGGNPAGNHG APAGSTGGDE FSLGTPGSSF ESPKNGDDMD DLFKDDEPDK
301: YASKNV
101: RDAFSHYGEI IDAKIIVDRD TGRSRGFGFI TYAAEEQASS AIMALDGKDL HGRNLRVSAA TERTSGFRND GGRGFGGGGY GGGSYGGGGY GGNSGGGGGG
201: GGYGGGGYGG NSGDGGGYAP SAGTDAFSGG NFAPAGGDNF AAGNFGSDSG FGGNPAGNHG APAGSTGGDE FSLGTPGSSF ESPKNGDDMD DLFKDDEPDK
301: YASKNV
001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
Arabidopsis Description
RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.