Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16016 | Sorghum | mitochondrion | 75.26 | 86.4 |
| Zm00001d041750_P001 | Maize | mitochondrion | 71.43 | 78.54 |
| Os12t0502200-01 | Rice | mitochondrion | 62.72 | 69.77 |
| TraesCS3A01G428400.1 | Wheat | mitochondrion | 52.26 | 66.37 |
| TraesCS3D01G424100.1 | Wheat | mitochondrion | 50.52 | 66.21 |
| TraesCS3B01G465800.1 | Wheat | mitochondrion | 51.22 | 63.64 |
| HORVU3Hr1G094330.2 | Barley | mitochondrion | 59.23 | 55.56 |
| GSMUA_Achr9P07090_001 | Banana | mitochondrion | 45.99 | 55.46 |
| Zm00001d012052_P001 | Maize | mitochondrion, plastid | 29.97 | 55.13 |
| Zm00001d031168_P001 | Maize | plastid | 28.92 | 53.55 |
| Zm00001d041246_P001 | Maize | nucleus | 26.48 | 52.41 |
| GSMUA_Achr4P03230_001 | Banana | mitochondrion | 45.99 | 51.56 |
| VIT_17s0000g07330.t01 | Wine grape | plastid | 48.43 | 50.18 |
| Solyc02g066930.2.1 | Tomato | nucleus | 37.28 | 49.54 |
| Zm00001d013568_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 26.48 | 47.8 |
| PGSC0003DMT400064758 | Potato | mitochondrion | 41.12 | 47.01 |
| KRH01278 | Soybean | mitochondrion, nucleus, plastid | 39.37 | 46.31 |
| KRH45033 | Soybean | nucleus, plastid | 38.33 | 44.9 |
| Bra035944.1-P | Field mustard | plastid | 39.72 | 43.35 |
| KRH56813 | Soybean | mitochondrion | 41.12 | 43.07 |
| KRH03133 | Soybean | nucleus | 41.12 | 42.91 |
| AT5G61030.1 | Thale cress | mitochondrion | 45.99 | 42.72 |
| CDY16825 | Canola | plastid | 39.02 | 42.59 |
| Zm00001d022065_P001 | Maize | mitochondrion | 44.25 | 41.23 |
| Bra012986.1-P | Field mustard | mitochondrion | 43.55 | 40.98 |
| CDY02175 | Canola | mitochondrion | 42.86 | 36.28 |
| CDX87197 | Canola | plastid | 40.77 | 35.56 |
| PGSC0003DMT400003685 | Potato | nucleus | 36.93 | 34.98 |
| Solyc02g088790.2.1 | Tomato | extracellular, plastid | 42.16 | 32.44 |
| Zm00001d006566_P002 | Maize | mitochondrion | 12.89 | 32.17 |
| Zm00001d024675_P001 | Maize | mitochondrion | 15.68 | 32.14 |
| Zm00001d034768_P005 | Maize | nucleus | 22.65 | 31.71 |
| Zm00001d041949_P001 | Maize | mitochondrion | 11.15 | 29.63 |
| Zm00001d026016_P002 | Maize | plastid | 14.63 | 28.0 |
| Zm00001d028661_P001 | Maize | plastid | 16.03 | 27.71 |
| Zm00001d019041_P001 | Maize | extracellular, plasma membrane | 24.39 | 23.89 |
| Zm00001d013543_P009 | Maize | extracellular, mitochondrion, plasma membrane | 25.44 | 23.47 |
| Zm00001d033511_P002 | Maize | cytosol, mitochondrion, nucleus | 23.34 | 22.56 |
| Zm00001d007799_P001 | Maize | mitochondrion, plastid | 24.39 | 18.23 |
| KRH54698 | Soybean | plastid | 40.77 | 17.36 |
| Zm00001d017930_P003 | Maize | plastid | 14.63 | 10.22 |
Protein Annotations
| EntrezGene:100284207 | MapMan:16.12.5.2 | Gene3D:3.30.70.330 | UniProt:A0A1D6IV87 | ProteinID:AQK39923.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf |
| PFAM:PF00076 | PRINTS:PR01228 | PFscan:PS50102 | PANTHER:PTHR44202 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| InterPro:RRM_dom_euk | SMART:SM00360 | SMART:SM00361 | SUPFAM:SSF54928 | UniParc:UPI000843C837 | EnsemblPlantsGene:Zm00001d023734 |
| EnsemblPlants:Zm00001d023734_P003 | EnsemblPlants:Zm00001d023734_T003 | SEG:seg | : | : | : |
Description
glycine-rich protein2 glycine-rich protein2
Coordinates
chr10:+:17851766..17855585
Molecular Weight (calculated)
28084.8 Da
IEP (calculated)
4.419
GRAVY (calculated)
-0.432
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTAAAATDL GGVGSGPLFP FGPLGTMMLA NKLGGLLKNA TSSNMSVYQA IRCMSSSKLF VGGLSYGTDD HSLRDEFAKY GQVIEAKIIL DRESGRSRGF
101: GFITYTSSEE ASAAITAMDG KTLDGRNIRV NHANERTGGF RSSGGYGGGG YGGGGGGYGG GGYGGGYGGG SGGYGGGGSG DYGGGSGGYG GNYGDRAGGG
201: YGGGGDYGVA GGAEGSFAAG GSDSFGSSNF ADSGFGENPA GSFGAMGGSS GADGFSAGTP GDGNKNDEIM DDLFKDDEPD SYANKRS
101: GFITYTSSEE ASAAITAMDG KTLDGRNIRV NHANERTGGF RSSGGYGGGG YGGGGGGYGG GGYGGGYGGG SGGYGGGGSG DYGGGSGGYG GNYGDRAGGG
201: YGGGGDYGVA GGAEGSFAAG GSDSFGSSNF ADSGFGENPA GSFGAMGGSS GADGFSAGTP GDGNKNDEIM DDLFKDDEPD SYANKRS
001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA
Arabidopsis Description
RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.