Factsheet for GSMUA_Achr9P07090_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
nucleus 2
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P02750_001	Banana	mitochondrion	34.45	54.67
EES16016	Sorghum	mitochondrion	55.46	52.8
TraesCS3D01G424100.1	Wheat	mitochondrion	48.32	52.51
TraesCS3B01G465800.1	Wheat	mitochondrion	50.42	51.95
TraesCS3A01G428400.1	Wheat	mitochondrion	49.16	51.77
Os12t0502200-01	Rice	mitochondrion	55.46	51.16
Zm00001d041750_P001	Maize	mitochondrion	55.88	50.96
GSMUA_Achr4P03230_001	Banana	mitochondrion	54.2	50.39
VIT_17s0000g07330.t01	Wine grape	plastid	55.88	48.01
Bra035944.1-P	Field mustard	plastid	52.94	47.91
CDY16825	Canola	plastid	52.1	47.15
Zm00001d023734_P003	Maize	nucleus, plastid	55.46	45.99
GSMUA_Achr7P27650_001	Banana	nucleus	25.63	45.86
GSMUA_Achr4P16080_001	Banana	mitochondrion	36.55	45.79
GSMUA_Achr8P05200_001	Banana	cytosol	29.41	45.16
KRH01278	Soybean	mitochondrion, nucleus, plastid	46.22	45.08
PGSC0003DMT400064758	Potato	mitochondrion	46.64	44.22
HORVU5Hr1G110370.1	Barley	mitochondrion	54.2	44.03
Solyc02g066930.2.1	Tomato	nucleus	39.5	43.52
TraesCS5A01G460900.1	Wheat	mitochondrion	55.46	43.28
TraesCS5B01G470700.1	Wheat	mitochondrion	55.46	43.0
AT5G61030.1	Thale cress	mitochondrion	55.46	42.72
TraesCS5D01G473100.1	Wheat	mitochondrion	54.62	42.48
GSMUA_Achr4P14550_001	Banana	nucleus	28.15	42.41
KRH45033	Soybean	nucleus, plastid	43.28	42.04
GSMUA_Achr3P30570_001	Banana	plasma membrane	29.83	41.76
Os10t0321700-01	Rice	mitochondrion	55.46	41.64
Bra012986.1-P	Field mustard	mitochondrion	53.36	41.64
Os07t0602600-01	Rice	mitochondrion	41.18	41.18
HORVU3Hr1G094330.2	Barley	mitochondrion	52.1	40.52
KRH03133	Soybean	nucleus	45.8	39.64
KRH56813	Soybean	mitochondrion	44.96	39.05
CDX87197	Canola	plastid	53.78	38.91
GSMUA_Achr6P34250_001	Banana	mitochondrion	17.23	37.27
CDY02175	Canola	mitochondrion	52.52	36.87
TraesCS2B01G203200.1	Wheat	mitochondrion	49.16	36.68
TraesCS2D01G184200.1	Wheat	mitochondrion	49.58	36.31
Zm00001d022065_P001	Maize	mitochondrion	46.64	36.04
GSMUA_Achr2P19090_001	Banana	mitochondrion	15.97	35.85
KXG36643	Sorghum	mitochondrion	47.06	35.44
GSMUA_Achr11P...	Banana	mitochondrion	15.55	34.26
GSMUA_Achr11P...	Banana	mitochondrion	18.91	34.09
GSMUA_Achr6P35640_001	Banana	nucleus	19.75	33.81
PGSC0003DMT400003685	Potato	nucleus	42.86	33.66
GSMUA_Achr5P26410_001	Banana	cytosol, mitochondrion, nucleus	15.13	31.3
Solyc02g088790.2.1	Tomato	extracellular, plastid	48.74	31.1
GSMUA_Achr8P07380_001	Banana	mitochondrion	17.23	30.37
GSMUA_Achr6P15340_001	Banana	plastid	19.33	26.14
GSMUA_Achr5P26170_001	Banana	nucleus, peroxisome, plasma membrane	16.81	23.81
GSMUA_Achr4P22370_001	Banana	nucleus	31.09	23.79
GSMUA_Achr2P12550_001	Banana	nucleus	22.27	23.66
GSMUA_Achr5P15860_001	Banana	plastid	16.81	23.53
GSMUA_Achr8P07840_001	Banana	mitochondrion, nucleus, plasma membrane	18.07	22.51
GSMUA_Achr3P22540_001	Banana	nucleus, peroxisome, plasma membrane	18.07	20.98
GSMUA_Achr4P28550_001	Banana	cytosol, mitochondrion, nucleus	27.73	19.13
TraesCS2A01G176700.1	Wheat	mitochondrion	47.48	15.42
KRH54698	Soybean	plastid	42.02	14.84
GSMUA_Achr2P01230_001	Banana	nucleus	16.81	12.82

Protein Annotations

EnsemblPlants:GSMUA_Achr9P07090_001	EnsemblPlants:GSMUA_Achr9T07090_001	EnsemblPlantsGene:GSMUA_Achr9G07090_001	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf
InterPro:RRM_dom	PANTHER:PTHR44202	PFAM:PF00076	PFscan:PS50102	SEG:seg	SMART:SM00360
SUPFAM:SSF54928	UniParc:UPI0002957BBB	UniProt:M0TY68	MapMan:16.12.5.2	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G07090_001]

Coordinates

chr9:+:4454000..4457301

Molecular Weight (calculated)

23941.8 Da

IEP (calculated)

4.488

GRAVY (calculated)

-0.592

Length

238 amino acids

Sequence
(BLAST)

001: MALASKLGNL LKQAVTSNPS LYQAIRCMSS SKVFVGGLSY GTDDQSLRES FTGFGEVVEA RVIVDRDTGR SRGFGFVTFT SGEEASAAIS GMDGKDLHGR
101: IVRVNYATDR TGGFRGGGYG GGGSGYGGSG GGYSGGGGYG GNTGGYGSVR GSFGGYGGGS GGENYPTAGG TGGSGSYVSG ASGNNFGSSG GFYSDNATTQ
201: SNSNFSGDGS YGNNNQDDLL EDNFKDADDE PEDYAKRG

Best Arabidopsis Sequence Match ( AT5G61030.2 )
(BLAST)

001: MAFLSKFGNI LKQTTNKQLN AQVSLSSPSL FQAIRCMSSS KLFIGGMAYS MDEDSLREAF TKYGEVVDTR VILDRETGRS RGFGFVTFTS SEAASSAIQA
101: LDGRDLHGRV VKVNYANDRT SGGGFGGGGY GGGGGGYGGS GGYGGGAGGY GGSGGYGGGA GGYGGNSGGG YGGNAAGGYG GSGAGGYGGD ATGHGGAGGG
201: YGSSGGFGSS GNTYGEGSSA SAGAVGDYNG SSGYGSANTY GSSNGGFAGD SQFGGSPVGN SSQFGGDNTQ FTAGGQFGGE DQFGSMEKSE TKMEDGPIGG
301: EFEDVAKRA

Arabidopsis Description

RBG3GR-RBP3 [Source:UniProtKB/TrEMBL;Acc:A0A178UBT5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.